Arvicola amphibius (Eurasian water vole): 119811695
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Entry
119811695 CDS
T08327
Symbol
Wrn
Name
(RefSeq) Werner syndrome ATP-dependent helicase isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamp03032
]
119811695 (Wrn)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119811695 (Wrn)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119811695 (Wrn)
DNA replication proteins [BR:
aamp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119811695 (Wrn)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
119811695 (Wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
119811695
NCBI-ProteinID:
XP_038181556
LinkDB
All DBs
Position
4:139058637..139160024
Genome browser
AA seq
1418 aa
AA seq
DB search
MNGNEMEGASLQRRVPAWMSVQEKRCTAEEQKARVQKSVLEDDLPFLEFTGSIVYSYEAS
DCSFLSEDISMRLSDGDVVGFDMEWPPIYKQGKQSRVAVIQLCVSESKCYLFHISSMSVF
PQGLKMLLENKSIKKAGVGIEGDQWKLLRDFDIKLESFVELTDIANEKLKCVETWSLNGM
VKHMLGKQLLKDKSIRCSDWSNFPLTDDQKLYAATDAYAGLIIYQKLENLGDTVQVFALN
KAEESLPNEMKRKLNSISEEMKDLATHFPVNCRNLETLQRVPVILKNISENVCSLRKVLF
DSANSNTKLKQVGSSNLMSSEDLAAVGEQEKQTGDCGTFHKIKEEPWDPELDSLVKHNEV
DMFRNKVKQEEGGFEDEAEDKLPEGDMERTCLMADTSEYELQILKQQTEGTKCNDVSHQP
SEHFSPTDDEKDSSYVIESDEDLEMEMLKSLENLNSDMVEPTHSRWLDMESHRSLPPEGE
DGDRSEAIEEQWQEEDRLLPEPNAKQINCLKTYFGHSSFKPVQWKVIHSVLEERRDNVVV
MATGYGKSLCFQYPPVYAGKIGIVISPLISLMEDQVLQLELSNIPACLLGSAQSKNVLRD
IKLGKYRIIYMTPEFCSGNLDLLQQLDSNIGITLIAVDEAHCISEWGHDFRSSFRTLGSL
KTALPLAPVIALSATASSSIREDIIHCLNLKNPQITCTGFDRPNLYLEVGRKTGNILQDL
KPFLVQKSSSAWEFEGPTIIYCPSRKMTEQVTAELRKLNLACRAYHAGLNINKRKDVHHW
FLRDEIQCVVATIAFGMGINKADIRRVIHYGAPKEMESYYQEIGRAGRDGLPSSCHVLWA
PADFNLTRHHFLEIHNEKFRLYKLKMIVKMEKYLHSNRCRRQIILSHFEDKQLQKASLDV
MGTEKCCDNCRSRLSHCYSTNDSDDTFQDFGPQAFQLLSAVDILEEKFGIGIPILFLRGS
NSQRLAEKYRHHKLFGAGKDRAESWWKALSHHLIAEGLLVEVPRQNKFVKTCSLTKKGRK
WLCEASKQSPPSLILQANEEMCPRKVLLPSSNPVSSEMKQHSSDLKPIGLTAEQSNLERM
YSYKASEESSGSDIPKTSVGTQSPGKSYSSSEPVISAQELDTRTVLYAKLVEARQKHANK
MDVPPAILATNKILLDMAKMRPTTVENVKQIDGVSEGKAALLAPLLEVIKHFCQVNSVQT
NLFSSTKPQEDQKSQEVKNGECSLSQSVAVTYSLFQENKMSLHSIAENRLLPLTAIGMHL
AQAAKAGYPLDMERAGLTPEVQKIITDVIRNPPINSDMYKVKLIRMLVPENIDTYLIHMV
IEILESGDSRSQPSCDPNRKRCLPGSEESGVSFKRTKDVVADTKKEEKEALNDASVFHKM
SSEMSKRKLPEWFAKGNVSSADTGSSSMAKTKKKGLFS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaacgagatggaaggcgcgtcactgcagaggagagttcctgcatggatgtct
gtgcaggagaaaagatgcactgcagaggagcagaaggcccgcgttcagaagagtgttctt
gaagatgatcttccattcttagaatttactggatccattgtgtacagttatgaagctagt
gattgctctttcttatctgaagatattagcatgcgtctgtctgacggagatgtggttgga
tttgacatggaatggccgcccatatacaaacaagggaagcaaagccgagttgctgtgatc
cagctgtgtgtgtctgagagcaaatgttacctgtttcacatttcttctatgtcagttttc
ccccagggattaaaaatgttgctagaaaataaatcaattaagaaggcaggcgttggaatt
gaaggagaccagtggaaacttctgcgtgattttgacatcaagttggagagttttgtggaa
ctgacagatattgccaatgaaaagctgaagtgtgtggagacttggagcctcaatggcatg
gttaaacacatgttaggaaaacagcttctgaaggacaagtccatccgctgtagtgactgg
agcaatttccccctcaccgacgaccagaaactgtatgcagccactgatgcttatgctggt
cttatcatctatcaaaaattagaaaatttgggtgatactgtgcaagtgtttgctctaaac
aaagcagaggaaagcctgcctaatgagatgaagagaaagctgaactcaatctctgaagaa
atgaaagacctggccacgcattttcctgtcaattgcagaaacttggagactctacagagg
gttcctgtaatattgaagaatatttcagaaaacgtgtgttccttgagaaaggtgctattt
gactctgcaaactccaacactaaactgaagcaggtcggtagttctaacctgatgtcatca
gaggatttggctgctgtgggagaacaagagaaacaaactggagactgtgggacttttcat
aaaattaaagaagagccgtgggatccagagcttgacagtctagtgaaacacaatgaagtt
gatatgtttagaaacaaagtgaagcaagaagaaggtggctttgaagatgaagcagaagac
aagctcccagaaggtgatatggaaagaacttgtttgatggcagatacttcagaatatgaa
cttcaaattttgaaacagcagactgaaggaacaaaatgtaatgatgtttctcaccaacct
tctgagcacttctcccccactgatgatgaaaaggattcctcttacgtaatcgagagtgat
gaagatttggaaatggagatgcttaagtctttagaaaacctgaatagtgacatggtggag
ccaactcattctagatggttggacatggaaagccatcggagtcttcctcccgagggggaa
gatggagacaggagtgaagccattgaggagcagtggcaagaggaggaccgcttattgccg
gaacccaatgcaaagcaaattaattgtctcaagacctacttcggccattccagttttaaa
ccggttcagtggaaagtcattcattctgtattagaagaaagaagagataatgttgttgtc
atggcaactggttatgggaagagtttgtgcttccagtacccacctgtttatgcaggcaag
attggcattgttatttcacctcttatttctttaatggaagaccaagttctccagcttgaa
ctgtccaacattccagcctgtttacttggatcagcacaatcaaaaaatgttctaagagat
attaaattaggcaaatacaggatcatatacatgactccagaattctgttctggtaacttg
gacctactccagcaacttgactctaatattgggatcacacttattgctgtggatgaggct
cactgtatttctgagtggggccatgactttagaagttcattcaggactctgggctctctt
aagacagcgctcccactggctccagtcattgcgctctctgctactgcgagttcttcgatc
cgggaagacatcatacattgcttaaacttgaaaaaccctcagatcacctgtactggattt
gatcgaccaaacctgtacttagaagttggacggaaaacagggaatatccttcaggatcta
aagccatttcttgtccaaaagtcaagttctgcctgggaatttgaaggtcctactatcatc
tattgtccttccagaaaaatgacagaacaagtaactgctgaacttaggaagctgaaccta
gcctgcagagcttaccatgcaggcttgaacattaataaaaggaaggatgttcatcattgg
ttccttagagatgagattcagtgtgttgtagctactatagctttcggaatgggcattaat
aaagctgacattcgcagagttattcattatggcgcccctaaggaaatggaatcatattac
caggaaatcggtagagctggccgtgatggacttccgagttcttgtcatgtactctgggct
ccagcagactttaacttaactaggcatcactttcttgagatacacaacgaaaagttccga
ttgtataaattaaagatgatagtgaaaatggaaaaatatcttcattccaatcgatgcagg
cggcaaatcatcttgtcccactttgaggacaaacaactgcagaaggcctccttggacgtt
atggggaccgagaagtgctgtgacaactgcaggtccagattgagtcattgctattccact
aacgactcagatgacacattccaagactttggtccacaagcattccagctactatctgct
gtggatatcttagaggagaagtttggaattgggattcctattttgtttcttcgaggatct
aattctcagcgtcttgcagaaaagtatcgccatcacaagctttttggcgctggcaaagac
cgagcagagagctggtggaaggccctttctcaccatctcatagctgaaggattattggta
gaagttcccaggcaaaacaagtttgtaaagacttgctccctcacaaaaaagggtagaaaa
tggctttgcgaagccagtaagcagtctcctccgagcctcatccttcaagctaatgaagag
atgtgtccaaggaaagttctgctgccaagttctaatcctgtatcttcagaaatgaagcag
cattcttctgatctaaagccaattggattaactgctgagcagtctaatttggagagaatg
tattcatacaaagcatctgaggaatcttctgggagtgacattcctaaaacaagtgtcggg
acgcaatcaccaggaaaatcttacagctcctcagagcccgtcatttcagcccaagagctg
gacacaaggactgtgttatatgccaagttggttgaagcgagacagaaacatgctaataaa
atggatgtgcctccagctattctggcaacaaacaagattctactagatatggccaaaatg
agaccgactactgttgaaaatgtgaaacagattgatggagtctccgaaggcaaagctgct
ctcttggcccctctgttggaagtcatcaaacatttctgtcaagtgaacagtgttcagaca
aacctcttttcgagtacaaaacctcaagaggaccagaaaagtcaggaagtgaaaaatgga
gaatgctcactctcccagtctgtggctgtcacgtactctttattccaggagaataaaatg
tccttgcacagcatagccgagaataggcttctgcctctcacagcaattggcatgcactta
gcccaggcagcgaaagctggctatcccctggatatggagcgagctggcctgaccccagag
gttcagaagattattactgatgttatccgaaaccctcccatcaactcagatatgtataaa
gttaaactcattcgaatgttagtccctgagaacattgacacgtaccttatccacatggta
attgagatcctagagagtggtgacagcagaagccagccttcctgtgaccccaacagaaag
agatgtttgcccggctctgaagagagcggcgtgagctttaagagaaccaaggatgtggtc
gctgataccaagaaagaagagaaagaagccttgaatgatgcctctgtcttccacaagatg
tcatctgaaatgtcaaaaagaaaattacctgagtggtttgccaaaggaaatgtgtcctca
gctgatactggcagctcatcaatggccaagacaaaaaagaaagggctttttagttaa
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