Arvicola amphibius (Eurasian water vole): 119811710
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Entry
119811710 CDS
T08327
Symbol
Scarf1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119811710 (Scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119811710 (Scarf1)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Phagocytosis
Scavenger receptors
119811710 (Scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
119811710
NCBI-ProteinID:
XP_038181586
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All DBs
Position
4:complement(45832754..45846118)
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AA seq
822 aa
AA seq
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MGPGLVVPLLLLWTQGSQGSTLDPTGQHVCIGGSPSELQCCPGWRQKDQECTIPICEGPD
ACRKDEVCVKPGLCRCKPGFFGAQCSSPCPGQYWGHDCRETCPCHPRGQCEPATGVCHCQ
PNYWGRLCEFTCTCGPHGQCDPKTGLCHCNPGWWSSTCLRPCQCKPVARCDQATGACLCP
SGWWGRRCGFKCNCHTSPCQQDSGNCICLKGWWGPECSRRCQCVRGQCSASSGHCSCPPG
FHGARCELPCDPGHYGAQCRESCGHCAPNATCSPVTGNCESCKPGWNGTQCKQPCPPGTF
GERCGEQCPRCWLGEPCHAETGHCQRCEPGWLGDRCENPCPPGSFGKGCSSSCPACVQGT
CDAVTGECVCSAGYWGTSCNSSCPSGFHGNNCSIPCQCPEGLCHPVSGACQLGRHGKNAL
IAGILVPLLLLLLGVICCAYCCSANRLAPKDRPERNGAALFRMKQQVWDTLTSLGAALPC
GSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDSDSGEEDESHAYSVPPR
EEMVPVAQEESPAASLPGGPFPPPEDTSTPFPIPRTSSLARAKRPSVSFAEGTKFAPQNG
RSSGDLSSPIRKPKRLSRGAQPRPEGQEAEEPAGPEQANVEEDAPTATSPGDAATSHHQL
PPSNRTVAGCGETSNGSIQESSGSVATIYMLAGTPQKPEGPVWSVLRRLGNYQKDQATPK
VKSAIPKPVRRALGRNQGNTGLSQSSGSSPDAMLSGTINPTEVRPEEASRGLGDGTESLG
TAQEPVSGNSSLEQVSQKQAEEKEQEEPLYENVVPMSVPLQH
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggggcctgggttggtggtccccctgctgctgctctggactcaggggtcccagggatcc
acactggacccaactggccagcacgtctgtataggcggcagcccctctgagctccagtgc
tgcccaggctggaggcagaaagatcaagaatgcaccatccccatctgtgaagggcctgat
gcctgcaggaaagatgaggtgtgcgtgaagccgggcctctgccgatgtaaacctggattc
ttcggagcccagtgcagctctccctgcccaggccagtactggggccatgactgccgtgag
acctgcccttgccatccgcgtggccagtgtgagccagccactggtgtgtgccactgtcag
cctaactactggggcagactctgtgagtttacctgcacctgcggtccccatggacagtgc
gacccaaagacgggcttgtgccactgcaatcccggctggtggtcatccacgtgtctgcgc
ccgtgccaatgcaagccagtagcgcgctgtgaccaggccaccggagcctgtctgtgccca
tctggctggtggggccgccgctgcggcttcaagtgcaactgtcacacctcgccctgccaa
caggactctggcaattgcatctgcctaaagggctggtggggccctgagtgtagccgtagg
tgccagtgcgtgcgaggccagtgcagtgcttcttctggccactgctcctgccctcctggt
ttccacggagcccgctgcgagctgccctgcgaccctggccactatggagcacaatgcaga
gaaagctgtggtcactgcgcgccgaatgcaacatgctctcccgtcacgggcaactgtgag
tcctgcaagccgggctggaatgggactcagtgcaagcagccatgtcctcctggcaccttt
ggtgagaggtgcggtgagcagtgcccccgctgctggcttggagagccctgtcatgcagaa
acagggcactgccagcgctgtgaacccggctggctaggggacagatgtgagaacccctgt
ccccccggttcctttgggaagggctgcagctcttcctgccctgcctgtgttcaggggacc
tgcgatgccgtgacaggggaatgtgtctgcagtgctggctactgggggaccagctgcaat
agttcctgcccatctggcttccatggaaacaactgctctatcccctgccaatgcccagag
gggctctgccaccctgtgtctggggcctgccagctgggccgtcatggtaaaaacgccctc
attgcgggtatcctggtacctctgctgctgctccttttgggtgtcatctgctgtgcctac
tgctgctccgctaatcggctggcccctaaggacaggccagagagaaatggagctgccctg
ttcagaatgaagcaacaggtatgggacacactcaccagcctgggtgctgcactgccctgt
ggctccctcagtaactacaagctaccctgggtgacagtttctcaccacgacccggaggtt
cccttcaaccacagctttattgagccaccctctgccggctgggcctccgatgactccttt
tcttctgactctgactctggagaagaggacgaaagtcatgcctactctgtgccacctcga
gaagagatggtccctgtggcccaagaagagtccccagcggccagccttcctggaggccca
ttccctccccctgaggacacttccacaccattccccatcccacgtacctccagcctggct
cgggctaagaggccatctgtctcctttgctgaaggcactaagtttgcaccacagaatggc
cgaagctctggggatctctccagccccatacgaaaacctaagagactctccagaggtgct
cagccacgtcctgaggggcaggaggctgaggagcccgcaggcccagaacaagcaaacgtg
gaagaggatgcacctaccgccacaagccccggagatgctgccaccagtcaccaccagctc
ccacctagtaacaggacagtggccgggtgtggggaaacctccaatggcagcatccaggag
agctcaggctctgtggccacaatctatatgctggcagggacaccccagaaacctgagggc
cctgtctggtctgtcctccgtcgtttgggaaactaccagaaagatcaggcaacgcccaag
gtcaagagtgccatccctaagcctgtacgccgagctctgggtcggaaccagggcaacact
gggctgtcccagagctctggctcatctccagatgccatgctgtctggaaccataaatccc
acagaagttaggccagaggaagcatccagaggtctgggagatggcactgagagcttaggg
acagcccaggaaccggtctctgggaacagctctctggaacaggtatcccagaagcaggct
gaagagaaggagcaggaggagcccctatatgagaacgttgtgcccatgtccgtgccactg
cagcactga
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