Arvicola amphibius (Eurasian water vole): 119811726
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Entry
119811726 CDS
T08327
Symbol
Pafah1b1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit beta isoform X1
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00565
Ether lipid metabolism
aamp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
119811726 (Pafah1b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119811726 (Pafah1b1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119811726 (Pafah1b1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119811726 (Pafah1b1)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119811726 (Pafah1b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_SCAP
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
LisH
LisH_PAC1
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR35_TULP_N
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
LisH_2
SutA-RBD
Motif
Other DBs
NCBI-GeneID:
119811726
NCBI-ProteinID:
XP_038181620
LinkDB
All DBs
Position
4:46651321..46700411
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIKTMHGHDHNVSSVAIMPNGDHIVSASRDKSIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcccagagacaacgagatgaactaaatcgagctatagcagattatcttcgt
tcaaatggctatgaagaggcatattctgtttttaaaaaggaagctgaattagatatgaat
gaagaattagataaaaagtatgctggtcttttggaaaaaaaatggacatctgttattaga
ttacaaaaaaaggttatggaattagaatcaaaactaaatgaagcaaaagaagaatttacg
tcgggtggtcctcttggtcagaaacgagacccaaaagaatggattccccgtccaccagag
aaatatgcgttgagtggtcataggagtccagtcactcgagttattttccatcctgtgttc
agtgttatggtctctgcttcagaagatgctacaattaaggtgtgggactatgagactgga
gatttcgaacgaactctcaaggggcacacagactctgtacaggacatttcctttgaccac
agtggcaagcttctggcttcctgttctgcagacatgacaattaaactatgggattttcag
ggctttgaatgcattaaaaccatgcatggccatgaccacaatgtctcttcagtagccatc
atgcctaatggagatcatatagtgtctgcctcaagggataaaagtataaaaatgtgggaa
gtgcaaactggctactgtgtgaagacatttacaggacacagagaatgggtacgtatggtg
cggccaaatcaagatggcactctgatagccagctgttccaatgaccagactgtgcgtgta
tgggttgtagcaacaaaggaatgcaaggcagagctccgagaacatgaacatgtggtagaa
tgcatttcctgggctccagaaagttcatattcttccatctctgaagcaacaggatctgag
actaaaaaaagtggcaagcctggacccttcttgctatctggttccagagacaaaactatt
aagatgtgggacgtcagtactggcatgtgccttatgactcttgtgggtcatgataattgg
gtacgtggagttctgttccattctggggggaagtttattttgagttgtgctgatgacaag
actctccgtgtatgggattacaagaacaagcgatgcatgaagaccctcaatgcgcatgaa
cactttgttacctccttggatttccacaagacggcaccctatgtggttactggcagtgta
gatcaaacagtaaaggtgtgggagtgccgttga
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