Arvicola amphibius (Eurasian water vole): 119811763
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Entry
119811763 CDS
T08327
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03082
ATP-dependent chromatin remodeling
aamp04714
Thermogenesis
aamp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119811763 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119811763 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119811763 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119811763 (Smarcd2)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119811763 (Smarcd2)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119811763 (Smarcd2)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119811763 (Smarcd2)
PBAF complex
119811763 (Smarcd2)
GBAF(ncBAF) complex
119811763 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
119811763
NCBI-ProteinID:
XP_038181691
LinkDB
All DBs
Position
4:15311178..15321325
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPNPALRGPGPSGGMGVPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKTDGDNAGTAGTPGGTPAADKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgttgcccccgctgagccccggcggcggcgcc
gttgccgcggcccttggtgcgccgcctccgcctgcgggacccggaatgctgcccaacccg
gctctccgaggcccggggccttctggaggcatgggggtcccgggagctgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcggcctggcatgtcaccaggaagc
aggatgcccatggctggcttgcaggtgggacctccagctggctccccatttggcacagct
gctccacttcgacctggcatgccacctaccatgatggatccattccgaaaacgcctgctt
gtgcctcaggcccagccccccatgcctgctcagcgccgagggttaaagaggaggaagatg
gcagataaggttctacctcagcgaatccgggagcttgtcccagagtctcaggcatacatg
gatctcttagcttttgagaggaagctggaccagaccattgctcgcaagcggatggagatc
caagaggctatcaaaaagcctctgacgcaaaaacgaaaacttcggatctatatttccaat
acattcagccccagcaagacagatggtgataatgcaggaactgcagggacccccggggga
accccagcagcagacaaggtggcttcctgggagcttcgagtggagggaaaacttctggat
gatcccagcaaacagaagaggaagttctcatctttcttcaagagccttgtcatcgagctg
gacaaggagctgtatgggcctgataaccacctggtggagtggcatcggatgcccaccacc
caagaaacagatggctttcaagtgaaacgaccaggagacctcaatgtcaagtgcaccctc
ctgctcatgctggatcatcagcctcctcagtataaactggacccccgactggcaaggttg
ctgggagtgcacacacagacgagggctgccatcatgcaagcgctgtggctttacatcaaa
cacaaccagctgcaggacggacacgagcgggagtacatcaactgcaatcgttacttccgc
cagatcttcagttgtggccgactccgtttctctgagattcccatgaagctggctggattg
ctgcagcatccagaccccattgttatcaatcatgtcattagcgtggatcctaatgaccag
aagaagacagcctgctacgacattgatgtggaggtggatgacccactgaaggcccagatg
agcaactttctggcttccaccaccaaccagcaggagattgcctctcttgacgtcaagatc
catgagactattgagtccatcaaccagctgaagacccagagggacttcatgcttagcttt
agcactgacccccaggacttcatccaagaatggctccgttcccaacgccgagacctcaag
atcatcacggatgtgattgggaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggctcaggaagcagttgggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgttgggaattcgcctgacctaa
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