Arvicola amphibius (Eurasian water vole): 119811875
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Entry
119811875 CDS
T08327
Name
(RefSeq) POU domain, class 5, transcription factor 1-like
KO
K09367
POU domain transcription factor, class 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
119811875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119811875
03021 Transcription machinery [BR:
aamp03021
]
119811875
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119811875
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119811875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
Motif
Other DBs
NCBI-GeneID:
119811875
NCBI-ProteinID:
XP_038181948
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All DBs
Position
4:107144809..107145876
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AA seq
355 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGDGSGGLEPGWVDPRTWISFQGPPGGPGIGPGVGPGSEVLGIS
PCLPPYEFCGGMAYCGPQVGLSLVPQVGLETSQPDDQAGAESNSEGASPEPSTVRPGAMK
LEKVEPSPEESQDMKDLQKELEQFAKVLKQKRITLGYTQADVGLTLGVLFGKVFSQTTIC
RFEALQLSFKNMCKLRPLLEKWVEEADNNENLQEICKTETLVQARKRKRTSIENRVRGNL
ESMFLQCPKPTLQQISIIAKQLGLEKDVVRVWFCNRCQKGKRSSADYAQREEYEAAGSPF
PGGPVSFPLPPGPHFGAPSYGSPHFTTLYSPVPFPEGEAFPTVPIAALGSPMHSN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggctggacacctggcttcagactttgccttctcacccccacctggtggtggtgatggg
tcgggagggctggagccaggctgggtggaccctcggacttggataagcttccaagggcct
ccaggtgggcctggaatcgggccaggggttgggccaggctcagaggtgttggggatctcc
ccttgtctcccgccatatgaattctgtggagggatggcatactgtggacctcaggttgga
ctgagcctagtgccccaagttggcctggaaacttcgcagcccgatgatcaggcaggagcg
gagagcaactcggagggggcctcccctgagcccagcactgtccgcccgggtgccatgaag
ttggagaaggtggaaccaagtcccgaggagtcccaggacatgaaagatctgcagaaggaa
ctggagcagtttgccaaggtgctgaagcagaagaggatcaccttggggtacacccaggcc
gacgtggggctcaccctgggtgttctctttggaaaggtgttcagccagaccaccatctgc
cgctttgaagctctgcagctgagtttcaagaacatgtgcaagctgcgccccctgctggag
aagtgggtagaggaagccgacaacaacgagaaccttcaggagatatgcaaaacggagacc
ctggtgcaggctcgaaagagaaagcggacgagcattgagaaccgcgtgagggggaacctg
gagagcatgtttctgcagtgcccgaagcccaccctacagcagataagcattatcgccaag
cagctcggcctggagaaggatgtggtccgagtgtggttctgtaaccgttgccagaagggc
aaacgatcaagcgctgattatgcccaaagagaagagtatgaggctgccgggtcccctttc
ccagggggtcctgtatcttttcctctacctccaggaccccattttggtgccccaagctat
gggagcccccactttaccacactctactctccagtcccgtttcctgagggcgaggccttt
cctactgttcccatcgctgctctgggctctcccatgcattcaaactga
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