Arvicola amphibius (Eurasian water vole): 119811897
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Entry
119811897 CDS
T08327
Symbol
Thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119811897 (Thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119811897 (Thoc6)
03041 Spliceosome [BR:
aamp03041
]
119811897 (Thoc6)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119811897 (Thoc6)
Spliceosome [BR:
aamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119811897 (Thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
NBCH_WD40
WDR54
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_SCAP
TIG
Phage_zn_bind_6
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
119811897
NCBI-ProteinID:
XP_038181990
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All DBs
Position
4:91722507..91728449
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AA seq
341 aa
AA seq
DB search
MEHAAPSPVPLGQAEVFQALQRLHMTVYSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPMVTFHAHDGPVYSMVSTDRHLLSAGDGEVKGWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRDRS
PEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPIRAPQKHATFYQDLILSAGQGSCVNHWQLSGELKAQVPASSPGL
LSLSLNQQPAAPECKVLTASGNSCRVDVFTNLGYRAFSMSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgctgcaccgtccccagtgcctctgggtcaggctgaggtctttcaggccctg
cagcggctgcacatgaccgtctactcccagagtgtctcaccctgtgggaagttcctggca
gctggcaacaattatgggcagattgccattttcagtttgtctgctgccttgagttcagag
gccaaagaagaaagcaaaaaacccatggtgaccttccatgcccacgatgggcctgtctat
agcatggtctccacggatcggcatctacttagtgctggggatggggaagtgaagggctgg
ctttgggcagaaatcctcaagaagggctgtaaggaactgtggcgtcgtcagccgccgtac
aggaccagcctggaagtacctgaaatcaatgccttgctgcttgtccccaaggagaattca
ctgattctagccgggggagattgccagctgcacactatggacctggaaaccgggaccttc
acacgggcccttcgaggccacacagactacatccactgcctggcactgagggaccgcagc
cctgaggtgctgtctggtggtgaggatggagctgtgcggctttgggatctccgtatagcc
aaagaggttcagaccattgaagtctataagcatgaggagtgctcaaggccccacaatggg
cgctggattggatgtttggctactgactcagactggatggtctgtggaggtggcccagcc
ctcaccctctggcacctcaggtcttccacgcccaccaccgtctttcccatccgggcacca
cagaagcatgccaccttctaccaggacctgatcctgtctgctggccagggctcttgtgtc
aaccactggcagctgagtggggagcttaaggcccaggtgcctgcttcttccccagggctg
ctcagcctaagcctcaaccagcagccagcagccccagagtgcaaggttctgactgcttca
ggcaacagctgtcgagtggatgtcttcaccaacctgggctaccgtgccttctccatgtcc
ttctga
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integrated database retrieval system
