Arvicola amphibius (Eurasian water vole): 119812204
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Entry
119812204 CDS
T08327
Symbol
Smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03082
ATP-dependent chromatin remodeling
aamp04714
Thermogenesis
aamp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119812204 (Smarce1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119812204 (Smarce1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119812204 (Smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119812204 (Smarce1)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119812204 (Smarce1)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119812204 (Smarce1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119812204 (Smarce1)
PBAF complex
119812204 (Smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
119812204
NCBI-ProteinID:
XP_038182605
LinkDB
All DBs
Position
4:22422213..22443079
Genome browser
AA seq
411 aa
AA seq
DB search
MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTDSFNNELKRLCGLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERSQGSIAPEEEQAANKAEEKKDEENIPMETEETHLEETTESQQNGEEG
TSTPEDKESGQEGADSMEVEGTSDSNTGSESNSATVEEPPTDPMPEDEKKE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaccatcttatgccccacctcccaccccagctcctgcaacacaaatgccc
agcacaccagggtttgtgggatacaatccatacagtcatctcgcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggcatcatctggtatcacgattcca
aagccgccaaagcctccagataagccgctgatgccctacatgaggtacagcaggaaggtc
tgggaccaagtaaaggcttccaaccctgacctaaagttgtgggaaattggcaagattatt
ggtggcatgtggcgagatctcactgatgaagagaaacaagaatatttaaacgaatacgaa
gctgaaaagatagagtacaatgaatctatgaaggcctatcataattcccctgcatacctt
gcatatattaatgcaaaaagtcgtgccgaagctgcattagaggaagaaagtcgacagaga
cagtctcgcatggagaaaggagaaccttatatgagcattcagcctgctgaggatccagat
gattatgatgacggcttttcaatgaagcatacagctaccgcccgtttccagagaaaccac
cgcctcatcagtgagatcctcagtgagagcgtggtccctgatgtgcggtcggttgtcaca
acagctagaatgcaggtcctcaagcgacaggtccagtctttaatggttcatcagcgaaaa
ctagaagccgagcttcttcagatagaggagcgacaccaggaaaagaagaggaaattcctg
gaaagcacagattcctttaacaatgaacttaaaaggttatgcggtctgaaggtggaagta
gacatggagaaaatcgcagccgaaattgcacaggcagaggagcaggcccgcaaaagacag
gaggagcgggagaaggaagcagcagagcaagcagagcgcagtcagggcagcattgcccct
gaggaagagcaagcagcgaacaaagccgaggagaagaaggatgaagagaacatccctatg
gagacagaggagacacacctggaagaaacgaccgagagccagcagaatggtgaagaaggc
acatccactcctgaggacaaggagagtgggcaggagggggctgacagcatggaggtcgaa
gggaccagtgatagtaatactggctcagagagcaacagtgcgacagtggaggagccgccc
acagaccccatgccagaagacgagaagaaggaataa
DBGET
integrated database retrieval system
