Arvicola amphibius (Eurasian water vole): 119812215
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Entry
119812215 CDS
T08327
Symbol
Lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
aamp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119812215 (Lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
119812215 (Lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119812215 (Lsm4)
03041 Spliceosome [BR:
aamp03041
]
119812215 (Lsm4)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119812215 (Lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
119812215 (Lsm4)
Spliceosome [BR:
aamp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119812215 (Lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
119812215
NCBI-ProteinID:
XP_038182621
LinkDB
All DBs
Position
4:104958560..104963695
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVREEAAKGRGRGGPQQQKQQKGRGMGGAGRGVFGGRGRGGIP
GAGRGQPEKKPGRQAGKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgttgtcgctgctgaagacagcacagaatcaccccatgctggtggagctgaag
aacggggagacgtacaatggacacctggtgagctgtgacaactggatgaacatcaacctt
cgagaggtgatctgcacgtcaagggacggcgacaagttctggcggatgccggagtgctat
atccgtggcagcacgatcaagtacctacgcatccctgatgagatcatcgatatggtgcgg
gaagaggccgccaagggccgcgggcgagggggaccgcagcagcagaagcagcagaaaggc
cgaggcatgggtggtgctggccgaggtgtgtttggtggccggggccggggtggcatacca
ggtgcaggccgcggtcagcccgagaagaagccagggcggcaagcagggaaacagtaa
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integrated database retrieval system
