Arvicola amphibius (Eurasian water vole): 119812344
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Entry
119812344 CDS
T08327
Symbol
Krt27
Name
(RefSeq) LOW QUALITY PROTEIN: keratin, type I cytoskeletal 27
KO
K07604
type I keratin, acidic
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04915
Estrogen signaling pathway
aamp05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
119812344 (Krt27)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
119812344 (Krt27)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119812344 (Krt27)
04147 Exosome [BR:
aamp04147
]
119812344 (Krt27)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
119812344 (Krt27)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
119812344 (Krt27)
Exosomal proteins of other body fluids (saliva and urine)
119812344 (Krt27)
Exosomal proteins of colorectal cancer cells
119812344 (Krt27)
Exosomal proteins of melanoma cells
119812344 (Krt27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Bacillus_HBL
GapR_DNA-bd
DUF1359
AIF-1
ATG16
HMMR_N
Motif
Other DBs
NCBI-GeneID:
119812344
NCBI-ProteinID:
XP_038182868
LinkDB
All DBs
Position
4:22313308..22318752
Genome browser
AA seq
450 aa
AA seq
DB search
MSVRFSSASRRLGSVRLSSTGAALGAGNTCGVPGIGSGFSCAFGGSSSAGGLSMGSASCG
AFTTNEHGLLSGNEKVTMQNLNDRLASYLENVQALEEANADLEQKIKDWYEKFGPGSCRG
LDNDYSRYFPIIDDLRSQIISATANNANIVLQNDNARLTADDFRMKYESELALHQSVDAD
INGLRRVLDELTLCRTDLEVQLETLTEELAYLKKNHAEEMQALQCAAGGNVNVEMNAAPG
VDLTVLLNNMRAEYEALAEQNRRDAEAWFQEKSATLQQQISDDAGATTSARNELTEMKRT
LQTLEIELQSLLAMKHSLECSLTETEGNYCSQLAQIQAQISALEEQLHQVRTETEGQKLE
YEQLLNVKAHLEKEIETYCRLIDGDEGSCVKSKGQGGPGNQIKEPSKTAIVKTVVEEVDP
RGKVLSSRIHTLEEKSTKVNKXTSKERMPS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttcgcttctcctccgcatccagacggctgggctccgtgaggctttccagcacc
ggagcagccttgggggctggaaatacatgcggagtgcccggcatcggaagtggtttctcc
tgcgcctttggaggcagttcctcggcaggagggctcagtatgggcagtgcatcttgtggg
gcctttacgaccaacgagcatggcctcctgtcgggcaatgagaaggtgaccatgcagaac
ctcaacgaccgcctggcctcctacctggagaatgtacaggcactagaggaggccaacgct
gacctggagcagaagatcaaggactggtatgaaaaatttggacctggttcgtgccgtggt
ctcgataatgactacagtagatacttcccgatcattgatgacctcagatcccagatcatc
tccgcgaccgcaaacaacgccaacatcgtcctgcaaaacgacaatgccagactgacggct
gacgacttcagaatgaagtacgaaagtgaactggcccttcaccagagcgtggatgcggac
atcaacggcttgcgcagggtcctggatgagctgaccctgtgcagaactgacctcgaggtc
cagctggaaacactcacagaggagctggcgtacctcaagaagaaccacgcggaggaaatg
caggctctgcagtgcgcagcgggaggcaacgtgaatgtggagatgaacgcggccccgggt
gtggacctcactgtgctgctgaacaacatgcgagctgagtacgaggccctggctgagcag
aaccgcagggacgccgaggcctggttccaggaaaagagtgccaccctgcagcagcagatt
tcagatgatgctggagccaccacctcagcccggaacgaacttactgagatgaaacgaacc
ctccaaaccctggagatagagctgcagtccctcttggccatgaaacactcgctggagtgc
tccctgaccgagaccgagggcaactactgctctcagctggctcagatccaggctcagatc
agcgccctggaggagcagctgcaccaggtcaggaccgagactgagggccagaagctggaa
tacgagcagctgctaaacgtcaaggctcacctggagaaggagatcgagacctactgccgc
ctcatagacggagacgagggctcttgtgttaagtcaaaaggccaaggaggacccggaaat
cagataaaggagccgtctaaaaccgccattgttaaaactgttgttgaagaagtagatccc
cgtggcaaggttctctcctccagaattcacaccctggaagaaaagtctaccaaagttaac
aagnnaacgagcaaagaaaggatgccttcttga
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