Arvicola amphibius (Eurasian water vole): 119812534
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Entry
119812534 CDS
T08327
Symbol
Ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamp03009
]
119812534 (Ddx52)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119812534 (Ddx52)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
90S particles
Helicases
119812534 (Ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
119812534
NCBI-ProteinID:
XP_038183197
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All DBs
Position
4:complement(37302226..37326433)
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AA seq
598 aa
AA seq
DB search
MDAYDLFRRLGAGAKFDVKRFSADAARFQVGKRKCDPDSSEVLQGLDFFGNKKSVSDECG
TLQTHQELQNEEKTEGDLLERSKEPRKKKRKMISEITAQEDFDTTIQWTSSVEAKIQEEK
KAKEEKKLISGKLEHLRKEKINCFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQN
ILDAGFQLPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALV
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYL
LKQDPPGIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSPKVKRAMFSATFAYD
VEQWCKLNLDNVVIVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEQAKRKKVAGQNSKKKETLEEKS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctatgatctgtttcgccggctcggagccggcgccaagttcgacgtgaagcgg
ttctcggcagacgctgctcgattccaggtaggaaaaaggaaatgcgatcctgattcttcg
gaggtactccaaggactggacttcttcggaaacaagaagtctgtctcagatgagtgtgga
acattacaaacacaccaagagctccaaaatgaggagaagacagagggggatctgttggag
agaagtaaggagcccaggaagaaaaagagaaagatgatttcagagattactgcacaggaa
gactttgatactactatacaatggacgtcctctgtggaagcaaagattcaggaggagaaa
aaagccaaagaagaaaagaaactaatttcaggaaagttggaacatctcagaaaggaaaag
atcaactgctttcggaacaaacacaagatacatgtacaaggaactgatcttcctgaccca
attgctacatttcagcagcttgaccaagagtataaaatcagttctcgattgctccagaac
attctagatgcaggcttccaattgcccacaccaattcagatgcaagccattccagttatg
ctgcatggtcgggaacttctggcttctgctcctactggatctgggaagactctggctttt
agcattcccattttaatgcagctgaaacaacctgcaaataaaggctttcgagccctggtt
atatccccaactcgagaacttgccagccagattcatagagaattaattaaaatatctgag
ggtacaggattcagaatacatatgatccacaaagctgcaatagcagctaagaaatttgga
cctaaatcatctaagaagtttgatattcttgtgactacaccaaatcgactgatctacttg
ttaaagcaggatccaccggggatagacctgacaagtgttgaatggctgatagtagacgag
tcagacaaactgtttgaagatggcaaaactgggtttagagaccagctggcttccattttc
ctggcctgcacatcccccaaggtcaaaagagcaatgttcagtgcaacttttgcgtacgat
gttgagcagtggtgcaagctcaacctggacaacgtcgttatcgtatccattggagcaagg
aattctgcagttgagactgttgaacaagagcttctctttgttggctccgagactggaaaa
cttctggccatgagggaacttgttaagaagggtttcaatccacctgttcttgtttttgtt
cagtctattgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtg
gatgtcattcatgcagaaagaacacagcagcagcgagataacacagtccacagcttcaga
gcaggtaaaatctgggttcttatttgtacagccctgctcgcaagagggattgattttaaa
ggcgtaaacctggtcatcaattatgattttccaaccagctcagtggaatatatccatagg
ataggtcgaactggaagagcagggaataggggaaaggctgttacatttttcactgaagat
gataaaccgttattaagaagtgttgccaatgttatccagcaggctggttgtcctgtacct
gaatacataaaaggtttccagaaactattaagcaaacaaaagaaaaagatgattaagaaa
ccgttggagagggagagcatcagtacaactccaaagtatttcttagagcaagctaaacgg
aaaaaggttgctggccaaaacagcaagaagaaagaaactcttgaagagaaaagttaa
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