Arvicola amphibius (Eurasian water vole): 119812588
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Entry
119812588 CDS
T08327
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04082
Neuroactive ligand signaling
aamp04721
Synaptic vesicle cycle
aamp04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119812588 (Slc6a4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
119812588 (Slc6a4)
04721 Synaptic vesicle cycle
119812588 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119812588 (Slc6a4)
Transporters [BR:
aamp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119812588 (Slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
119812588
NCBI-ProteinID:
XP_038183270
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Position
4:complement(44328413..44348075)
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AA seq
629 aa
AA seq
DB search
METTPLNSQKVLSACKDKEDCQGNGVLQKGVPTPGDRPEPGQISNGYSADPSTSADEATH
SIPTATTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLPY
TIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIIA
WALYYLISSFTDQLPWTSCKNSWNTGNCTDYFSQDNVTWTLHSKSPAEEFYLRHVLQIHQ
SKGLQDLGTISWQLALCILLIFTVIYFSIWKGVKSSGKVVWVTATFPYIILSVLLVRGAT
LPGAWRGVVFYLKPNWQKLLEPGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDA
LVTSVVNCMTSFISGFVIFTVLGYMAEMRNEEVSEVAKDAGPSLLFITYAEAIANMPAAT
FFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCVLGSLLTL
TSGGAYVVTLLEEYATGPAVLTVALIEAIAVSWFYGISQFCSDVKEMLGFSPGWFWRICW
VAISPLFLLFILCSFLMSPPQLRLFQYNYPHWSIILGYCLGTSSIICIPTYIIYRLISTP
GTLKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacctttgaattctcagaaggtcctgtcagcatgcaaagacaaagaggac
tgccaaggaaacggtgttctccaaaagggtgtccccaccccaggggacaggcctgagcct
ggccaaatatccaatgggtactctgcagatcccagcaccagtgcagatgaagctacacac
tctatcccaacagccaccaccaccctggtggcggagattcgccaaggggaacgggagacc
tggggcaagaagatggattttctcctgtctgtcatcggctatgctgtagacctgggcaac
atctggcgttttccctacatatgctaccagaatggcggaggggccttcctccttccctac
accatcatggccatctttggggggatcccactcttttacatggagcttgcgctgggccag
taccaccgaaatgggtgcatttctatatggaggaaaatctgcccgattttcaaagggatt
ggctatgccatctgcatcattgccttctatattgcctcctactacaacaccatcattgcc
tgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagctgcaag
aactcctggaacaccggcaactgcaccgactacttctcccaggacaacgtcacctggaca
ctccattccaagtcacctgctgaggagttttacctgcgccacgtcctgcagatccaccag
tctaagggcctccaggacctggggaccatcagctggcagcttgctctctgcatcctactc
atcttcaccgtcatctactttagcatctggaaaggagtcaaatcatctggcaaggtggtg
tgggtgacagccaccttcccttacatcatcctgtctgtcctgctggtgaggggggccacc
cttcctggagcctggagaggggtcgtcttctacctgaaacccaactggcagaaactcttg
gagcctggggtgtgggtggatgctgctgctcagatcttcttctctctcggcccgggcttt
ggggttctcctggcttttgctagctacaacaagttcaataacaactgctaccaagacgcc
ctggtgaccagtgtggtaaattgcatgacgagcttcatttctggctttgtcatcttcacg
gtgcttggctacatggccgagatgaggaatgaagaggtgtccgaggtggccaaagatgca
ggccccagcctcctcttcatcacatacgcggaggccatagccaacatgccagcagccacc
ttcttcgccatcatcttcttcctcatgctaatcacactgggcttggacagcacgtttgca
ggcctggaaggcgtgataacagcagtgctggatgagtttccacacatctgggccaagcgc
cgggagtggtttgtgctcattgtggtcattacttgtgtcttgggatccctgctcacgctg
acttctggaggggcatatgtggtgaccctgttggaagagtacgccaccgggcccgcggtg
ctcactgtggcactcatagaagccattgccgtgtcttggttctacggtatcagtcagttc
tgcagtgatgtgaaggaaatgcttggcttcagcccgggatggttctggaggatctgctgg
gtagccatcagccctctgtttctcctgttcatcctttgcagctttttgatgagtccaccc
caactgcggcttttccaatataattatcctcactggagcatcatcttgggctactgctta
gggacgtcttctattatctgcatccccacgtatatcatttatcggctgatcagcactcca
gggacgctgaaggagcgcatcattaaaagtatcactcctgagacaccaacggaaattccc
tgtggggacatccgcttgaatgccgtgtaa
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