Arvicola amphibius (Eurasian water vole): 119812614
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Entry
119812614 CDS
T08327
Symbol
Pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119812614 (Pds5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119812614 (Pds5a)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
119812614 (Pds5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
Cnd1
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
119812614
NCBI-ProteinID:
XP_038183324
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All DBs
Position
1:36868877..36968518
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AA seq
1336 aa
AA seq
DB search
MDFTQPKPAAALCGVVSADGKIAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDSED
EKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFIT
RQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNK
KVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEA
CIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLA
VVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDL
TEYLKVRSHDPEEAIRHDVIVTIITAAKRDLTLVNDQLLGFVRERTLDKRWRVRKEAMMG
LAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETE
ERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLMT
IAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPK
QPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLE
LLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLI
PILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLG
HISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKL
LVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQ
EPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPV
KERRAHARQCLLKNISIRREYIKQNPIATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQDV
DQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCDV
ALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFCNDKSYISEETRVLLLTGKPKPTGVL
GTVNKPLSATGRKPYVRSAGTETGSNINANSELSPSAGSRSREQSSEASETGVSENEENP
VRIISVTPVKNIDTVKNKEINSDQSTQGNISSDRGKKRIVAAAGAENIQQKPDEIVDESG
PPAPSKPRRGRRPKSESQGNATKNDDLNKPTSKGRKRAAGSQESPGGLEASNAKAPKLQD
GAKKATPAERPIDLQR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggacttcacgcagccgaagcctgccgctgccctctgtggcgtcgtgagtgcggacgga
aagatcgcttacccccctggagtaaaggaaatcaccgacaagatcaccacagacgaaatg
atcaaacggctgaagatggtagtgaaaacttttatggatatggatcaggattcggaagat
gaaaagcagcaatatctcccactagccttgcatctcgcatctgaattctttctcaggaac
cctaataaagatgtgcgccttcttgtagcatgttgtctagctgatatatttcgaatttat
gccccagaagctccatatacttcccacgataaacttaaggacatatttctctttattacc
agacagttaaaaggtttggaggatacaaagagtccacagtttaatagatacttttattta
ttagagaatttagcttgggttaaatcatataacatctgctttgagttggaagattgcaat
gaaatttttattcagctttttaggactctcttctcagtaatcaacaatagccacaataag
aaggtacaaatgcacatgttagacttgatgagttctatcatcatggaaggtgatggagtt
actcaagagttactggattctattcttatcaacctcatccctgcacacaagaacttaaat
aaacagtccttcgaccttgcgaaagtcctgttgaaaaggacagtccagactattgaagca
tgcattgccaattttttcaatcaagtcctggtgctgggaagatcgtcagtcagtgatcta
tccgaacatgtatttgatctgattcaggaacttttcgctatagatcctcatttattgtta
tctgtcatgccacagcttgaattcaaactgaagagcaatgatggtgaagaacgattagct
gtggttcgacttctagctaaattgtttggctctaaagattcagatttggcaactcagaat
cggcctctttggcagtgttttcttgggcgctttaatgacattcatgttcctgtgagatta
gaaagtgtgaaatttgccagtcactgtttgatgaaccatccagatttagcaaaggacctt
acggaatatttgaaagttaggtcacatgatccagaagaagccattcgtcatgatgtcatt
gttactataataacagctgccaaaagagaccttaccttagtaaatgatcagttacttggg
tttgtcagggaaaggacactggataagcggtggcgagtaagaaaagaagccatgatgggt
cttgctcagctgtataagaaatactgtcttcatggtgaggcaggaaaggaagctgcagag
aaagtcagctggataaaggacaaacttctgcacatctactatcagaacagcatcgacgac
aaactcttggtagagaaaatctttgcccaatatcttgttccccataacctggaaaccgaa
gagagaatgaaatgcttatattatttatatgccagcttggatccaaatgctgtgaaagct
ctcaatgaaatgtggaagtgtcagaacatgcttcggagtcatgtgcgtgaactgttggat
ttacacaagcagcctacatcagaggctaactgttctgccatgtttggaaaactgatgacc
atagcaaagaatttgcctgaccctgggaaagcacaagattttgtaaagaaatttaaccag
gttcttggtgatgatgagaagctgcggtctcagttagaattgttaatcagcccaacctgt
tcatgcaaacaagctgacatttgtgtgagagaaatagctcggaaacttgcaaatcctaag
cagccaaccaacccctttctagagatggtcaaatttcttttggaaagaattgctcctgtg
catattgattcagaagccataagtgcactagtaaaattgatgaataaatcaatagaaggg
acagcagatgatgaagaggagggtgtaagtccagattcagccattcgctcaggacttgaa
cttcttaaggttctgtctttcacacatcctacctcgttccactctgcagaaacgtatgag
tccttgttacagtgtctgagaatggaagacgacaaggtagcagaagctgcaatacaaatt
tttaggaacacaggccacaaaatagaaacagaccttccccagatacgatcaacattaatt
cccattttacatcagaaggcaaagaggggtactccacatcaagctaaacaggctgtgcat
tgtatccatgccatcttctcaaataaggaagtccagcttgcacagatatttgagccactc
agcaggagtctgaatgctgatgtaccagaacaacttatcactccattagtctcacttggg
cacatttccatgttagcaccagatcagtttgcttccccaatgaaatctgtagtggcaaac
ttcattgttaaagatcttctgatgaatgacaggtcaacaggtgagaagaatggaaaattg
tggtctccagatgaggaagtttctcctgaagtactagcaaaggtacaggcaattaaactt
ctggtaaggtggctgttgggtatgaaaaacaaccagtctaaatctgccaattcaactctt
cggttactgtcagcgatgttggttagtgagggtgacctgacagaacagaagaggatcagt
aaatcagatatgtctcgcttgcggttagctgctggtagtgccataatgaagcttgctcag
gaaccttgttaccatgaaattattaccccagaacagttccagctctgcgcacttgttatt
aatgatgagtgctaccaagtaaggcaaatatttgcccagaagcttcataaagcacttgtg
aagttactgctccctttggagtatatggcgatctttgctttgtgtgccaaagatcctgtg
aaggaaagaagagcacacgcacgccagtgtttactaaagaacatcagcatacgcagggag
tacattaaacagaaccccattgctaccgagaaattactatcactactgcctgagtatgtg
gttccatacatgattcacctgctagcccatgatcctgattttacaagatcacaagatgtt
gatcaacttcgtgatataaaagagtgcctgtggtttatgcttgaagtcttgatgacaaag
aatgagaacaatagtcatgcctttatgaagaagatggcagagaacattaagctgaccaga
gatgcccagtctccagatgagtccaagacgaatgagaaactttatacagtttgtgatgtg
gctctgtgtgttataaatagtaaaagtgctttgtgcaatgcagactcgccaaaggatcca
gtcctcccaatgaagttctttacacaacctgaaaaggacttctgcaatgacaaaagttat
atttcagaagagacaagagtgcttctgttaacaggaaagccaaagcctactggagtgcta
ggtacagtaaacaagcctttatcagcaacaggaagaaagccttatgttaggagcgctggc
acagagactggaagcaatattaatgccaattcagagctgagtccttcagccggaagtcgt
tcaagggaacagagttcagaggcatcagaaactggagttagtgaaaatgaagagaatcct
gtgagaatcatttctgtcacgcctgtaaagaatattgatactgtaaagaataaggaaatt
aattctgatcagtctacccaaggcaacatcagcagtgaccgaggaaagaagagaattgta
gcagcagctggtgctgagaatatccaacaaaaaccagatgagatagtagatgagtcagga
cctcctgcgccttccaaacctagaagaggacgtcgccccaaatctgaatctcagggcaat
gcaaccaaaaatgatgatctaaataaacccactagcaagggaaggaagagagctgcaggc
agccaggagagccctgggggtctggaagcaagtaatgccaaagcgcccaagctacaagat
ggagccaaaaaggcaacaccagcagagagaccaatcgatttacaaaggtaa
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