Arvicola amphibius (Eurasian water vole): 119812618
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Entry
119812618 CDS
T08327
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119812618 (Vps53)
Membrane trafficking [BR:
aamp04131
]
Protein recycling
Others
EARP complex
119812618 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
119812618 (Vps53)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
NBD94
hAT-like_RNase-H
COG3_N
FUSC
COG5_N
Med11
Motif
Other DBs
NCBI-GeneID:
119812618
NCBI-ProteinID:
XP_038183319
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All DBs
Position
4:45152115..45288161
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AA seq
833 aa
AA seq
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MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWHMTERISVEFCHVTRTELSKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLSDGTLLKKLESPPPSTNPFLEEETTPEMEELALEKGELEQPKKPKAPDNPFHG
IVSKCFEPHLYVYIESQDKNLSELIDRFVTDFKAQGPPKPNTDEGGAVLPSCADLFVYYK
KCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSGGLTISSLLKEKEGS
EVARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVIS
SSIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLAST
RKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVR
KAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLK
RSEQSGMLELFRQRLPAPPSGAENSSTLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagttcgtggaggagctggaggccgtgctgcagctcacg
cctgaggtgcaactagccatcgagcaggtatttccaagccaggatcctcttgatcaagct
gacttcaatgctgttgagtacatcaatactctgtttccaacagagcaatctctggcaaac
atagatgatgtcgtgaacaaaattagactgaaaataaggagactggatgataatatccgg
actgtcgtaagaggtcagacaaatgtggggcaggacggaaggcaagcactcgaagaggcc
cagaaagccattcagcagctctttggcaaaatcaaggatatcaaagacaaagcagaaaaa
tcagaacaaatggtgaaggaaatcacccgagatattaagcagttagaccatgccaagcgc
cacctgaccacctcaatcacgacactgaaccacctacatatgctcgccggtggggtcgac
tccctggaagccatgaccaggcgcagacagtatggagaagttgccaacctccttcagggc
gtaatgaatgttctggagcactttcacaagtacatgggaatcccacagatccggcagctt
tctgagagggtgaaggctgcgcagactgagctaggacagcagatcctggctgattttgaa
gaggcgtttccttcacagggtaccaagaggccaggaggacccagcaatgtcctgagagac
gcgtgcctggtggctaatatcttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacagcatctatcagagtatctagtactttttcaagaaaatcaagatgtcgcctgg
ctggacaaaattgacagacgttatgcctgggtgaagcgccagcttgtggactatgaggag
aagtatggtcggatgtttccgcgcgagtggcacatgacggagaggatctcagtagaattc
tgccatgtgacgaggacagaactttccaaaatcatgagagccagagctaaggaaattgaa
gtgaaattgcttctttttgcaattcagagaacaactaactttgaggggtttcttgcaaaa
cgcttctccggttgcaccctgtcagacggaactctgctgaaaaagctggagtccccacca
ccatctaccaatcctttcctggaagaggagacaacaccagagatggaggagctggcactg
gagaaaggagaattagagcaaccaaaaaagccgaaagccccagacaatccatttcatggc
attgtttccaagtgttttgagcctcatctctacgtgtacattgagtcccaggacaaaaac
ctcagcgagctgatagaccggtttgtgacagatttcaaagcccagggcccaccgaaaccg
aacactgacgaagggggtgctgtactccccagttgtgctgacctctttgtctactacaag
aagtgcatggtgcagtgctcacagctcagcacaggcgagcccatgatcgccctgactacc
atattccagaagtacctccgagaatacgcctggaagatcctctctggcaatctgcctaag
accagcagcagcagcggggggctgaccatcagcagcctcctcaaagagaaggagggctct
gaagtggccaggttcactctggaggagctgtgcctcatctgcagcatcctcagcacagcc
gagtactgtctggccaccacccagcagctagaagaaaaactcaaagaaaaagtggatgtg
agtctgactgaacgaattaatctcactggagaaatggacacattcagcactgtcatctcc
agcagcatccagctgttggttcaggatctggacgcagcctgcgatcctgccctgattgcc
atgagcaagatgccgtggcagaatgtggagcatgttggtgaccagagcccttatgtcact
tctgttattcttcacattaagcagaacgtccctatcatccgtgacaacctggcttccaca
cggaaatacttcacgcagttctgcattaaatttgcaaactcattcatccccaaatttatc
acccacctcttcaagtgcaagccaatcagcatggtgggagcagagcagctgctgctggac
acgcactccctgaagatggtcctgcttgacctcccatccatcggctcccaggtggtgagg
aaggcacctgccagttacactaagatcgtcgtaaaaggcatgacccgggctgaaatgatt
ctcaaggtggtgatggcccctcatgagccattggtggtatttgttgacaactatatcaag
ctccttacggattgcaacacagaaaccttccagaaaatactggacatgaaggggctgaag
aggagtgagcagagcggcatgctggagctctttcgacagaggctccccgccccaccctca
ggggcagaaaattccagcacgctgtccctaatggctccaacaccagagcaggaatcatcc
cgcatccgcaaacttgagaaactgattaagaagagactgtaa
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