Arvicola amphibius (Eurasian water vole): 119812729
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Entry
119812729 CDS
T08327
Symbol
Ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119812729 (Ubtf)
03021 Transcription machinery [BR:
aamp03021
]
119812729 (Ubtf)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
119812729 (Ubtf)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
119812729 (Ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
DUF4473
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
119812729
NCBI-ProteinID:
XP_038183526
LinkDB
All DBs
Position
4:19227986..19241228
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AA seq
764 aa
AA seq
DB search
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
FLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKGGSEKPKRPVSAMFIFSEE
KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGK
LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPAAPNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKDRMVEI
GSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLR
GPNPKSSRTTLQSKSESEDEEDEEEDDDDDEEEEEDDENGDSSEDGGDSSESSSEDESED
GDENEDDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaagcagactgtcccacagacctggaaatggccgctcccaaaggccaagac
cgctggtcccaggaagatatgctgactctgctggagtgcatgaagaacaaccttccatcc
aacgatagctccaagttcaaaaccacagagtcgcatatggactgggaaaaggtggcgttt
aaggacttttcgggagacatgtgcaagctcaaatgggtggagatctctaatgaggtgagg
aagttccgtacactgacggaattgattcttgatgctcaggaacatgttaaaaatccttac
aaaggcaaaaaactcaagaaacacccagatttcccaaagaagcctctcacaccttatttc
cgcttcttcatggagaagcgggccaaatatgcgaaacttcaccccgagatgagcaacctg
gacctgaccaagattctatctaagaaatacaaggagcttccagaaaagaagaagatgaaa
tatattcaggacttccagagggagaaacaggagttcgagcgaaacctggcccgattcagg
gaggatcaccctgaccttatccagaatgccaagaagtcggacatccccgagaagcccaaa
actccccagcaactgtggtatacccatgagaagaaggtgtatctcaaagtgcggccggat
gccactacgaaggaggtgaaggactccctggggaagcagtggtctcagctctcggacaaa
aagaggctgaaatggattcataaggccctggagcagcggaaggagtacgaggagattatg
cgtgattatatacagaagcaccccgagcttaacatcagcgaggaaggaatcaccaaatct
accctcaccaaggccgaacgccagctcaaggacaagtttgatgggcgacccaccaagcca
cctccgaacagctactccttgtactgtgcagagctcatggccaacatgaaggatgtgccc
agcacagagcgcatggtgctatgcagccagcagtggaagctgctctcccagaaggaaaag
gatgcctatcataagaagtgcgaccagaaaaagaaagattatgaggtagaactgctgcgg
ttcctggagagcttgcccgaggaggagcagcagcgggtcctcggggaggaaaagatgttg
aacatcaataagaagcagaccaccagtccagcctccaagaagccttctcaggaaggtggc
aagggcggctctgaaaagcccaagcggcctgtgtctgccatgttcattttctcagaggag
aagcgacggcagctacaggaggagcggcctgagctctcagaaagcgagcttacccgcctg
ctggcccgcatgtggaacgacttgtcagagaagaagaaggctaaatataaggcccgagag
gctgcactgaaggcacagtctgagaggaagccaggtggagagcgtgaagagcggggcaag
ctgcctgagtcacccaagagagctgaggaaatctggcagcagagtgtcatcggagattat
ctggctcgcttcaagaatgaccgggtgaaagccttgaaggccatggagatgacttggaac
aacatggaaaagaaggagaagctgatgtggattaaaaaggcagcagaagaccaaaaacga
tatgagagggagttaagtgagatgcgggcccctccagctgctccgaactcttccaagaag
atgaagttccagggggagcccaagaaacctcccatgaacggttaccagaagttctcccag
gagctgctgtccaacggggagctgaatcacctgccactgaaggaccgcatggtagagatc
ggcagccgctggcagcgcatctcccagagccagaaggaacactataaaaaactggctgag
gagcagcaaaaacagtacaaggtgcacttggacctctgggtcaagagcctgtctccccag
gaccgtgcagcatacaaagagtacatctccaataaacgtaagaacatgactaagcttcga
ggcccaaatcctaagtccagccggaccaccctgcagtctaagtcggagtcggaggatgag
gaggacgaggaggaggatgacgacgatgacgaggaggaagaggaagatgatgagaatggg
gactcctctgaggatggaggggattcttctgagtctagcagcgaagatgagagcgaggat
ggagatgagaacgaggatgatgatgaggacgaggatgacgacgaggatgacgatgaggat
gaagacaatgagtctgagggcagcagctccagctcttcctcttcaggggactcctcagac
tctgattccaactaa
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