Arvicola amphibius (Eurasian water vole): 119812765
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Entry
119812765 CDS
T08327
Symbol
Trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04080
Neuroactive ligand-receptor interaction
aamp04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119812765 (Trpv1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
119812765 (Trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamp04040
]
119812765 (Trpv1)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119812765 (Trpv1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
119812765
NCBI-ProteinID:
XP_038183600
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Position
4:complement(47709722..47730875)
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AA seq
842 aa
AA seq
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MKKWGSLDSGESEHPLQENSCLDPPDRDLNSRPSPAKPHIFTTRSRTRLFGKGDSEEASP
MDCPYEEGGLVSCPVITVSSVVTIQRPGDGPACVRQASQDSVSTGVGVEKPPRLYDRRSI
FDAVAQSNCQELESLLPFLQKSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLL
DVARQTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFK
KTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADN
TADNTKFVTNMYNEILILGAKLHPTLKLEELTNKKGLTPLALAASTGKIGVLAYILQREI
HEPECRHLSRKFTEWAYGPVHSSLYDLSCVDTCERNSVLEVIAYSSSETPNRHDMLLVEP
LNRLLQDKWDRFVKRIFYFNFFVYCLYMIVFTTAAYYRPVEGLPPYKLRNTVGDYFRVTG
EILSVLGGFYFFFRGIQYFLQRRPSLKSLFVDSYSEILFFVQSLFMLASVVLYFCHRKEY
VASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVT
LIEDGKNDSVPVESTPHRWRGPACRPPDNSYNSLYSTCLELFKFTIGMGDLEFTENYDFK
AVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCM
RKAFRSGKLLQVGFTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFS
LRSGRVAGRNWKNFALVPLLRDASTRDRHTTQPEEVHLKHFAGSLKPEDAEVFKDSMAPE
EK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggggtagcttagactctggggagtctgagcacccactccaagagaactcc
tgcctggaccctccggacagagaccttaactccaggccatctccagccaagccccacatc
ttcaccaccaggagccgcacccggctttttgggaagggtgactcagaggaggcctcccct
atggattgcccttatgaggaaggcggactggtctcctgccctgtcatcaccgtcagctct
gttgtcactatccagaggcctggggatgggcctgcctgtgtcaggcaggcatcccaggac
tctgtctccaccggtgtcggtgtggagaagccccccaggctctatgaccgcaggagcatc
ttcgatgctgtggctcagagtaactgccaggagttggagagcctgctgccctttctgcag
aagagcaagaagcgcctgactgacagcgaattcaaagacccagagacaggaaagacctgt
ctgctaaaagctatgctcaacctgcacaacgggcagaacgacaccatcgctctgctcctg
gatgtcgcacggcagaccgacagcctgaagcagtttgtcaacgccagctacacagacagc
tactacaagggtcagacagcactgcacatcgccattgagaggcgaaacatgacactggtg
accctcctggtagagaacggagcagacgttcaggccgcggccaacggagacttcttcaag
aaaaccaaagggcggcctggcttctactttggtgagctacctctgtcgctggctgcgtgc
accaaccagctggccattgtgaagttcctgctgcagaactcctggcagccagcagacatc
agtgcccgggattcggtgggcaacacggtgttacatgccctggtggaggtggcagataat
acagctgacaacaccaagttcgtgacaaacatgtacaacgagatcctgatcctgggcgcc
aaactccaccccaccctgaagctggaagaactcaccaacaaaaaggggctcactccactg
gctctggctgctagcactgggaagattggggtcttggcttacattctccagagggagatc
cacgaacctgagtgccggcacctgtccaggaagttcaccgaatgggcctacgggcctgtg
cactcctccctttatgacctgtcctgcgttgacacctgtgagaggaactcagttctggag
gtgattgcctacagcagcagcgagacccctaatcgccatgacatgcttttggtggaacct
ttgaacagactcctacaggacaagtgggacagatttgtcaagcgcatcttctacttcaac
ttcttcgtctactgcttgtatatgatcgtcttcaccacggctgcctactatcggcctgtg
gaaggcttgcccccctataagctgaggaacactgttggagactatttccgagtcactgga
gagatcctgtctgtgttgggaggattctacttcttcttccgagggattcagtatttcctg
cagaggcggccatccctcaagagtttgtttgtggacagctacagcgagatacttttcttt
gtgcagtctctgttcatgctggcgtctgtggtactgtacttttgccaccgcaaggagtac
gtggcttccatggtgttctccctcgccatgggctggaccaacatgctctactataccaga
ggattccagcagatgggcatctatgctgtcatgatagaaaagatgatcctcagggacctg
tgtcgattcatgtttgtctacctcgtgttcttgtttggattttccacagccgtggtgaca
ctaattgaggatgggaagaatgactctgtgcctgtggagtccaccccacacaggtggcga
gggcctgcctgcaggccacccgacaactcctacaacagcctgtactccacgtgcctggag
ctgttcaagttcaccatcggcatgggcgacttggagttcaccgagaactacgacttcaag
gctgtcttcatcatcctgttactggcctatgtgatcctcacctacatcctcctgctcaac
atgctcattgccctcatgggtgagacggtcaacaagatcgcacaagagagcaagaacatc
tggaagctgcagagagccatcaccatcctggacacagagaagagtttcctgaaatgcatg
aggaaggccttccgctccggcaagctgctacaggtggggttcacgccagatggcaaggat
gactaccggtggtgtttcagggtggacgaggtgaactggactacctggaacaccaatgtg
ggcatcatcaacgaggacccgggcaactgtgagggcgtcaagcgcaccctgagcttctcc
ctgaggtcaggccgagttgcagggagaaactggaagaactttgccctggttccccttctg
agggatgcaagcactcgagataggcataccacccagcctgaggaagttcatctgaagcat
tttgcaggatcccttaagccagaggatgctgaggtcttcaaggactccatggccccagag
gagaagtga
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