Arvicola amphibius (Eurasian water vole): 119812825
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Entry
119812825 CDS
T08327
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
119812825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119812825
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119812825
Membrane trafficking [BR:
aamp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
119812825
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119812825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
HU-CCDC81_bac_2
GAS
Motif
Other DBs
NCBI-GeneID:
119812825
NCBI-ProteinID:
XP_038183708
LinkDB
All DBs
Position
4:18641715..18649471
Genome browser
AA seq
470 aa
AA seq
DB search
MERRRITSARRSYASTETVVRGLGPSRHMGTIPRFSLARMPPPLPARVDFSLAGALNAGF
KETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRE
LRLRLDQLTANSTRLEVERDNLAQDLSTLRQKLQDESNLRLDAENNLTAYRQEADEATMA
RLDLERKIESLEEEIQFLRKIHEEEVRELREQLAQQQVHVEMDVAKPDLTAALREIRTQY
EAVATSNMQEAEEWYRSKFADLTDAASRSAELLRQAKHEANDYRRQLQALTCDLESLRGT
NESLERQMREQEERHTRESVSYQEALARLEEEGQNLKEEMARHLQEYQDLLNVKLALDIE
IATYRKLLEGEENRITIPVQTFSNLQIRGGKSTKEGEGHKVTRHLKRLTIQVIPIQAHQI
VNGAPPALETSLDTKSVSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaagacgcatcacctctgcacgtcgctcttatgcctccaccgagacggtggtc
aggggcctgggtcccagccgccacatgggtaccatcccgcgcttctctctggctcgaatg
cctcccccactccctgccagggtggacttctccctggcaggtgctctcaatgctggcttc
aaggagactcgagccagtgagcgcgcggagatgatggagctcaatgaccgctttgctagc
tacatcgagaaggtccgcttcctggaacagcaaaacaaagcgctggcagctgagctgaac
cagcttcgcgccaaggagcccaccaaactggcggacgtctaccaggcagagctgcgggag
ctgcggctgcggctggaccagcttactgccaacagtacccggttggaggtggagagggac
aatttggcacaggacctcagcaccctgaggcagaagctccaagatgaaagcaacctgagg
ctggatgctgagaataacctgactgcttatagacaggaggctgatgaagctaccatggcc
cgtctggatctggagaggaagattgagtcgctggaggaggagatccagttcttgaggaag
atccatgaggaggaagttcgagaactccgggagcagctggcccaacagcaggtccatgtg
gagatggatgtggccaagccagacctcacagcagccctgagagagattcgaactcaatac
gaggcagtggccaccagtaacatgcaagaggccgaggagtggtatcggtccaagtttgca
gatctcacagacgcagcttcccgcagcgcagagttgctccgccaggctaagcacgaggct
aatgactatcgtcgccaactgcaggccttgacttgcgacctggagtctttgcgcggcacg
aacgagtccctggagaggcaaatgcgtgaacaagaggagcgccacacacgagagtcggtg
agttaccaggaggcgctcgcccggctggaggaggagggtcaaaacctcaaggaggagatg
gcccgccacctacaggagtaccaggatctactcaacgtaaagctagccctggacatcgag
attgccacctataggaaactgttggagggcgaggaaaaccgcatcactatccctgtacaa
actttctccaacctgcagatccgagggggcaaaagcaccaaagaaggggaaggccacaaa
gtcacaagacatctcaaaaggctcacaatacaagttataccaatacaggctcaccagatt
gtaaatggagccccgccagctctcgaaaccagcttggacaccaagtccgtatcagaggga
cacctcaagaggaacatcgtggtaaagacagtggagatgcgtgatggtgaggtcattaag
gagtccaagcaggaacacaaggatgtggtgtga
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