Arvicola amphibius (Eurasian water vole): 119813139
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Entry
119813139 CDS
T08327
Symbol
Vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119813139 (Vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119813139 (Vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119813139 (Vps36)
Membrane trafficking [BR:
aamp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
119813139 (Vps36)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119813139 (Vps36)
Exosomal proteins of colorectal cancer cells
119813139 (Vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
NAI2_C
MA3
BBL5_2nd
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
119813139
NCBI-ProteinID:
XP_038184217
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All DBs
Position
4:complement(148546627..148573939)
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AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIWRDQKNNECCMA
IPLSQVVFIEEQAAGIGKSAKIVVHLHPAPANKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENVPVSQSLQTNKGAQPGRVRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKEKQGDVTEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP
VRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagacgctggtgatccag
cagcgcggggtgcgcgtctacgacggcgaggagaagataaaattcgatgctgggacactt
cttcttagtacacaccggctgatttggagagaccagaaaaacaatgagtgctgcatggcc
attcctctgtcccaggttgtgttcatcgaggaacaggcggccggaattgggaagagtgcc
aaaatcgtggttcatctgcacccggctcctgctaacaaagagcccggtccattccagagc
agtaagaactcctacatcaaactctccttcaaagagcatggccagatcgagttttatagg
cgtttatcagaggaaatgacacagaggaggtgggagaatgtgccagtttcccagtcacta
cagacaaataaaggagcccagccaggaagagtaagagctgtagggattgtgggtatcgaa
aggaaactcgaagaaaaaagaaaagaaacagacaaaaacatttctgaggcctttgaagac
ctgagcaagctaatgatcaaggctaaggaaatggtagagttatcaaaatcgatcgctaat
aagattaaagagaaacaaggtgacgtcacagaagatgagaccatcagattcaagtcctac
ttgctgagtatgggaatcgccaacccggttacccgggagacctatggctcaggcacacag
taccacatgcagctggccaaacagctggctggaatattgcaggcaccattagaggaacgt
gggggaataatgtcgctcacagaggtgtactgtttagtgaaccgagctcgagggatggag
ttgctctccccagaagatttagtgaatgcatgcaagatgctggaggcgctgaaattgcct
gtcaggcttcgggtttttgacagtggtgtcatggtaattgagcttcaaacccacaaagaa
gaggagatggtggcctcagccctggagacagtttcagaaaggggatctttaacatcagaa
gagtttgccaaacttgtggggatgtctgtcctcctagctaaagaaaggctgcttctcgct
gagaagatgggccatctttgccgagatgactccgtggaaggcttgcggttttacccaaat
ttatttatgacacagaactaa
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