Arvicola amphibius (Eurasian water vole): 119813353
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Entry
119813353 CDS
T08327
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03440
Homologous recombination
aamp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119813353 (Top3a)
03460 Fanconi anemia pathway
119813353 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamp03032
]
119813353 (Top3a)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119813353 (Top3a)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119813353 (Top3a)
DNA replication proteins [BR:
aamp03032
]
Eukaryotic type
DNA Topoisomerases
119813353 (Top3a)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119813353 (Top3a)
FA (Fanconi anemia) pathway
119813353 (Top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
119813353
NCBI-ProteinID:
XP_038184563
LinkDB
All DBs
Position
4:60235169..60277340
Genome browser
AA seq
1003 aa
AA seq
DB search
MIFPITLLAFRWQRRPGGRALSRAAMEVAFRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
KEGLSKFNKIYEFDYRLYGQNVTMIMTSVSGHLLAHDFQMRFRKWQSCNPLVLFEAEIEK
YCPENFIDIKKTLEREAQHCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSE
ITPRAVRAACENLTEPDQRISDAVDVRQELDLRIGAAFTRFQTLRLQRIFPAVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEVFHRIKVTHDHKDGTVEFNWKRYRLFNHTACLVLY
QLCMEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLAALVEQQTLDPHWGAFAQNILERGGPTPRNGNKSDQAHPPIHPT
KYTSSLQGDERRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLIILARNYLDV
YPYDHWSDKLLPVYEQGFRFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKFQVLRQQVQKYKQVFTEAVAKAKKLDEALSQYLGERTEVAQQEELFPAMPEPVRKCPQ
CNKDMVLKTKKSGGFYLSCMGFPECRSAVWFPDSVLEASRDSSVCPTCQPPPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLKEIFGLRLSRAPTRATQPSGHLQASQVTNRMDSSQH
SLSQPLVNRHTGPSKAMAQTFLPPTAAGESNSVTCNCGQEAVLLTVRKQGPNQGRQFYKC
SGGGCNFFLWADSSHPTGGGPPTSASRLPGNSVGWPSASDSNMDGFGSLGSDSDGNASCL
CGQPAVTRTVQKDGPNQGRQFHTCAKPREQQCGFFQWVDENVAPGNCTAPPWAGGRGKAQ
RPEAASKRLRAGSSDAGSTAKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccaatcaccctcttagcgttccggtggcagcgacggcctggaggccgtgcc
ttgtcccgcgctgccatggaagtggccttccgaggagtgcgaaaagttctctgtgtggct
gagaaaaacgacgctgccaaggggatcgccgacttgctctccaatggtcgtatgcggcgg
aaagaaggcctttcaaaattcaacaagatttatgaatttgactatcgtctgtatgggcaa
aatgttaccatgataatgacttcagtctctggacatttgctggctcatgatttccagatg
aggtttcggaaatggcagagctgcaatcccctagtcctctttgaagcggaaattgaaaag
tactgcccagaaaattttatagacatcaagaagactctggagcgagaggcacagcattgc
caggcactggtgatctggactgactgtgacagagaaggtgaaaacatcgggtttgagata
atccacgtatgcaaggctgtaaagcccaatctacaggtgctgcgggcccgtttctctgag
atcacgccacgtgcagtcagggcagcctgtgagaacctgactgagcctgaccagagaata
agcgatgcagtggatgtgaggcaggagctggatctgcggattggagctgccttcacgagg
ttccagaccctgcggctccagcggattttccctgcggttctggcagagcagctcatcagc
tatggcagttgccagttcccaacactggggtttgtggtggaaaggttcaaagccattcag
gcttttgtgccagaagtcttccacagaattaaagtaactcatgaccacaaagatgggacc
gtagagttcaactggaaacgataccgtctctttaaccacacagcttgtcttgttctttat
cagttgtgtatggaggatcccatggcaaccgtggtagaggtcaggtctaagccaaaaagc
aagtggaggcctcaagctttggacactgtggagctggagaagctggcttctcggaaattg
agaataaatgctaaagaaaccatgaggattgcagagaaactctacacacaagggtacatc
agctacccccgaacagaaacaaacatcttccccaaagacttaaacctggctgcgttagtg
gaacagcagaccctggatccacactggggggcgtttgctcagaacattctagagcgaggt
ggccccactccacgaaatgggaacaaatctgatcaagctcacccccccattcaccccacc
aaatacaccagcagcctgcagggagatgaacggcgactatatgaattcatcgttcgccat
tttctggcttgctgctcccaggatgctcaggggcaagagactactgtagagattgacatt
gcccaggaacgctttgtagcccacggcctcataattctggcccgtaactacctggatgtg
tatccgtacgatcactggagtgacaagctcctccctgtctatgagcaaggcttccgcttt
cagcccagcactgtggaaatggtggatggggagaccagcccaccccagctgcttaccgag
gctgacctcattgccctcatggagaagcatggtatcggtactgatgcaactcatgcagaa
cacattgaaaccatcaaagcccggatgtatgtgggactcacctcagacaagcggttcctc
cctgggcacctgggcatgggacttgtggaaggttacgattccatgggctatgagatgtcc
aagcctgacctccgtgccgagctggaagctgatcttaagctgatctgcgagggcaagaag
gataagtttcaggttctaaggcagcaagtgcagaaatacaagcaggttttcactgaagca
gtggctaaggcaaagaaattggatgaagccttatctcaatacttaggagaacggacagag
gtggcccagcaagaagagctcttcccagccatgccagagcctgttcgaaagtgtcctcag
tgcaacaaggatatggtcctgaagaccaagaagagtggtgggttctaccttagctgcatg
gggttccccgaatgtcgatcagctgtgtggtttcctgactcggtgctggaggccagcagg
gacagcagtgtgtgtcccacttgtcagccaccccctgtgtacaggttgaagttgaagttt
aagcgtggtagccttcccccaaccatgcccctggagtttgttggctgcataggtggatgt
gatgagacattgaaggaaatcttcggcctgcgactttcacgggcccccacaagagccacc
cagccctctggccacctgcaggccagccaggtcaccaacaggatggacagcagtcagcac
agtctctctcaacctctggtcaacagacatactggaccttcaaaggcaatggctcaaacc
ttcttaccacccactgctgctggtgaaagtaactctgtgacctgcaattgtggccaagag
gctgtgctgctcactgtccgcaagcagggccccaaccagggccggcagttctataagtgc
agtggtggtggttgcaactttttcctgtgggctgacagcagccatcccactggaggaggg
ccccccacctctgcatcaagactccccggcaactctgtggggtggccgtcagcctcagac
agcaacatggatgggtttggcagccttggcagtgacagtgatggaaatgcgtcctgcctg
tgcgggcagcctgctgtcacacggactgtgcagaaggacggacccaaccaaggacgccag
ttccacacctgtgccaagccacgagagcagcagtgtggcttctttcagtgggtagatgag
aatgtggccccagggaactgtacagccccaccatgggcaggaggcagaggaaaagcccag
agaccagaggctgcaagcaaaagactaagagctggttcctcagatgcaggatctacagcc
aaaaagccccggaaatgtagcctctgccaccagcctggacacacccgccctttttgtcct
cagaacagatga
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