Arvicola amphibius (Eurasian water vole): 119813454
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Entry
119813454 CDS
T08327
Symbol
Sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aamp01009
]
119813454 (Sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119813454 (Sh3rf1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119813454 (Sh3rf1)
Protein phosphatases and associated proteins [BR:
aamp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119813454 (Sh3rf1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119813454 (Sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
119813454
NCBI-ProteinID:
XP_038184720
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All DBs
Position
4:complement(115006761..115166644)
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AA seq
892 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV
EELPSNILLVRLLDGIKQRPWKPGPGGGSGTNCTNALRAQGSTVANCGAKDLPSSQCGQQ
PRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEG
MLADKIGIFPISYVEFNSAAKQLIEWDKPPAPGVDTAECPSATAQSGTAPKHADTKKNTR
KRHSFTSLTMANKSSQASQHRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVSYQAALGTMNPPLPPPPLLAATVLPSTPSGASAA
AVAAAAAAAAAGMGARPVAGSTDQIAHLRPQTRPSVYVAIYPYAPRKEDELELRKGEMFL
VFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQASRGVTMVSP
STAGGPPQKLQGNGVAGNPSVVPTAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRTV
AAHNQERPTAAVTPIQVQNAACLGPASVGLPHHSLASQPLPPMAGPAAHVAAIGINRTNA
SLACAASASLASPNITAAALETEPSGRTVTILPGLPTSPDSVAAACGNSSAVKPDKDSKK
EKKGLLKLLSGASTKRKPRVSPPASPTLDVELGAADMPLQGAVGPELPLGGGHGRAASCS
TDGDGPVVSGTAALAQDAFHRKASSLDSAVPIAPPPRQACSSLGPVMNEARPVVCERHRV
VVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgtcttgttggaccttctggagtgccccgtgtgtctagaacgtctggat
gcttctgcgaaagtcttaccttgccagcacacgttttgcaaacgctgtttgctgggaatt
gtgggttcccggaatgaactcagatgtcctgagtgcaggactcttgttggctctggcgtg
gaggagctccccagtaatatcttactggtcagacttctggatggcatcaagcagaggcct
tggaaacctggccctggtgggggcagcgggaccaactgcacaaacgcattaagggctcag
ggcagcactgtggctaattgtggcgcaaaagatctgccaagctcccagtgtgggcagcag
cctcgggtgcaagcctggagccccccagtgaggggtataccgcagttaccatgtgccaaa
gcgctatataactacgaaggaaaggagcccggagacctgaagttcagcaaaggcgacatc
atcattttgcgaagacaagtggacgagaattggtaccatggcgaagtcaatggggtccac
ggcttcttccccaccaactttgtgcagatcatcaaacctttacctcagcccccacctcag
tgcaaagcactttatgactttgaggtgaaagacaaggaagcggacaaagactgccttccc
tttgcaaaggatgacgtcctgactgtgatccgcagagtggatgagaactgggctgaggga
atgctggcagataaaataggaatattcccaatttcatatgtggagtttaactcggctgcc
aagcagctgattgagtgggacaagcctccagcaccaggagtagacaccgcagaatgcccg
tcagctacagcgcagagtggcaccgcccccaaacatgctgacaccaagaagaacaccagg
aagcgacactccttcacctccctcaccatggccaacaagtcctcccaggcatcgcagcac
cgccactccatggagatcagtcctcctgtgctcatcagttccagcaaccccaccgccgcg
gcccgtataagcgaactgtctggactctcctgcagcgccccgtctcaggttcatattagc
accactgggttaatcgtgaccccacccccaagcagccctgtgacaactggcccttcgttc
acgttcccgtcagatgtctcctaccaagctgcccttggaactatgaaccctcctcttccc
ccaccccctctcctggctgccacggtcctcccatccacaccatcaggcgcctctgccgcc
gccgttgctgctgctgctgctgctgctgctgctggaatgggagccaggcctgtggcggga
tccactgaccagattgcacatttacggcctcagactcgccccagtgtgtatgttgctata
tacccctacgctccccggaaagaagacgagcttgaactgagaaaaggggagatgtttctg
gtatttgagcgttgccaggatggctggttcaaagggacatcgatgcacaccagcaagata
ggtgttttccctggcaactatgtggctccagtcacaagggcggtgacaaatgcctcccaa
gctaaagtccctatgtctactgcgggtcaggccagtcggggggtgactatggtcagtcct
tctactgcaggagggcctccccagaagctccaaggcaacggtgtggctgggaatcccagc
gttgtccctacagctgtggtgtcagcagctcacatccagacgagtcctcaggcgaaggtc
ctgctccacatgacggggcagatgacagtcaaccaggctcgcaatgccgtgaggacagtt
gcagcacataaccaagagcgccccacagcagcagtgacacccatccaggtccagaatgct
gcctgcctcggtcctgcatcagtggggctgccccatcattccctggcctctcaacccctg
cctcccatggcaggtcctgctgcccatgttgctgctatcggcatcaatcgaaccaatgct
tccctggcctgcgctgcaagcgcctccctagcctccccaaacattaccgctgccgctttg
gagaccgaacccagtggtcggacagtgaccatcctccctggactccccacatctcccgac
agtgttgcagcagcgtgcgggaacagttcagctgtgaaaccagacaaggatagtaagaaa
gaaaaaaagggtctactgaagctgctctctggggcttccaccaaacgcaagccccgagtc
tccccgccagcgtcacctaccttggatgtggagctgggtgcagctgacatgcccctgcag
ggagcagtgggccccgagttgccgctagggggcggtcacggccgggcggcctcctgctcc
acagatggagatggcccagtggtctccgggacagcagccttagcccaagacgctttccat
cgcaaggcaagctccctggactccgccgtgcccatcgccccaccacctcggcaggcctgc
tcctccctgggtcccgtcatgaatgaagccaggcctgttgtttgtgaaaggcacagggtg
gtggtttcctatcctcctcagagtgaggcggaacttgaactcaaagaaggagatattgtg
tttgttcataaaaaacgcgaggatggctggttcaaaggcacgttacaaagaaatgggaag
accggccttttcccggggagctttgtggaaaacatctga
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