Arvicola amphibius (Eurasian water vole): 119813468
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Entry
119813468 CDS
T08327
Symbol
Nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119813468 (Nup85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119813468 (Nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119813468 (Nup85)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119813468 (Nup85)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119813468 (Nup85)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119813468 (Nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
Ribosomal_S19e
Motif
Other DBs
NCBI-GeneID:
119813468
NCBI-ProteinID:
XP_038184736
LinkDB
All DBs
Position
4:complement(6311878..6330374)
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AA seq
656 aa
AA seq
DB search
MEELDCEPAVAWIPGVNSEKKQMCFAWGPGEMLLCETAFNRRDKSETAPSCPFIYIVRKD
ADVYSQILRKLFNESHGIFVGLQRIEEELSGKSRKAQLVRVSKNYRSVIRACMEEMHQVA
VAAKDPASGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
SADVLGSENPSKHDSFWNLVTVLVLQGRLDEARQMLSKEADANPPSAGMCRILGDLMRTM
PILSPGNTQTLTELELKWQHWREECERHLQDSTFAASPRLESLCKIMLGDEATLLEHKEL
LSNWYHFLVTRLLYSNPTVKPIDLHFYAQSSLNMFLGGESSPEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCRLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLG
VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRLYGEKRFGDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLASGRPGCGEPDAQRLQDDDIETTKVEMLRLALARNLAQAIIREGSLEGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcgattgcgagcccgcagtagcttggattccaggcgtgaattctgagaag
aagcaaatgtgttttgcctggggtcctggggagatgctcctgtgcgaaacggccttcaac
agaagagacaaatcagaaacggcaccgagctgcccctttatctatatcgtaaggaaagat
gcagatgtttactctcagattttgagaaaactcttcaatgaatcccatggtatcttcgtt
ggcctgcaaaggattgaggaggaattgtctggaaaatccaggaaagctcaattggttcga
gtgagtaaaaattaccgctctgtcatccgggcctgtatggaagaaatgcaccaggttgca
gttgccgctaaagatccagccagtggccgacagttcagcagccaggtctccattttgtca
gccatggagctcatttggaatctgtgtgagatcctttttattgaagtagccccagctggc
cctctcctcctccatcttcttgactgggttcgactgcacgtgtgtgaggtggacagtttg
tcggcagatgttctgggcagtgagaacccaagcaagcatgacagcttctggaacttggtg
actgtcttggtgcttcagggccggctggatgaggcccggcaaatgctgtccaaagaagct
gacgccaaccccccttctgcaggcatgtgccgcatccttggggacctgatgaggacaatg
cccattctcagtcctggcaacactcagacgctgacggagctggagctgaagtggcagcac
tggcgtgaggagtgtgagcggcacctgcaagacagcacattcgcagccagcccccgcctg
gagtctctctgcaagatcatgctgggggacgaggccactttgttggagcacaaggagctt
ctgagcaactggtaccatttcctagtgaccaggctcctgtattccaaccccacagtgaaa
cccattgacttgcacttctatgcccagtccagcctcaacatgtttctgggaggcgagagc
agtccggagccgctggacaacatcttgatggcagcctttgaatttgatattcaccaagtg
atcaaggagtgcagcattgccttgagcaactggtggtttgtagctcacctcaccgacctt
ttggatcactgcagactcctccagtcacacaacctctatttcggttctaacatgagagaa
ttccttctgctggaatatgcctcaggactgtttgctcatcacagcttgtggcagctgggg
gtggattactttgactactgcccggagctgggccgagtttccttggagctgcacattgag
cggattcctctcaacacagagcagaaagccttgaaggtgctgaggatttgtgagcagcgg
cagatgaccgaacaagttcgaagtatctgtaaaatcttggccatgaaggctgtccgtaat
aatcgcctgggctctgccctctcttggagcatccgtgccaaagatgctgcttttgccaca
ctcgtatctgacagattcctcagggattattgtgaaagaggctgcttttctgatttggat
ctcattgacaacctgggcccagccatgatgctcagtgatcgactgacttttcttggaaag
taccgggagttccacagactgtatggggagaagcgctttggtgatgctgcttctcttctg
ctgtccctcatgacctctcagatcgcaccccgttctttctggatgactctgctcacagat
gccctacctcttttggaacagaaacaggtgattttttcagcagaacagacatacgagctg
atgcgctgcctggaagacttggcctcagggaggccagggtgtggcgagcccgacgcccag
cgactccaggatgacgacatagagaccaccaaggtggaaatgctgagactggctcttgcc
cggaatcttgctcaggcaattataagagaaggctcactggaaggttcctga
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