Arvicola amphibius (Eurasian water vole): 119813545
Help
Entry
119813545 CDS
T08327
Symbol
Atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05014
Amyotrophic lateral sclerosis
aamp05017
Spinocerebellar ataxia
aamp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119813545 (Atxn2l)
05017 Spinocerebellar ataxia
119813545 (Atxn2l)
05022 Pathways of neurodegeneration - multiple diseases
119813545 (Atxn2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119813545 (Atxn2l)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119813545 (Atxn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
119813545
NCBI-ProteinID:
XP_038184827
LinkDB
All DBs
Position
1:complement(128625072..128637311)
Genome browser
AA seq
1070 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLPATTAPPGPPAAVSPCLG
PASAAGSGLRRGAESILAAPPPPQPGAVAIGSVRGQSTGKGPPQSPVFEGVYNNSRMLHF
LTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFK
PSDVLLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESD
MSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESS
PQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLVSREGKYIPLPQRVREGPRGGVRC
SGSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPN
NRPSGEASVPPAPAVGRMYPPRSPKSAAPAPASASCPEPPIGSAVVSSASIPVTSSVVDP
GAGSISPASPKISLAPTDVKELPTKEPGRTLEAQELARIAGKVPGLQNEQKRFQLEELRK
FGAQFKLQSSSSPETGLDPFPSRILKEEAKGKEKEVDGLLTSDPMGSPVSSKTESILDKE
DKPPLAAVGGTEGPEQLPPSCPSQTGSPPVGLIKGDDKEEGPVTEQVKKSTLNPNAKEFN
PTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAVQAPQ
MYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLVAATPYSS
YIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAE
QPTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGS
GQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTNMAHVTQ
AHVQTGVTAAPPPHPGAPHPPQVMLLHPPQGHGGPPQGAVPPSGVPALSASTPSPYPYIG
HPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRAEGLQVGQDARVLGGD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggcctcccggcgggaccagccctcctaacggcggcctcccgggg
ccgctgcccgccaccacggctcccccggggcctcccgcggccgtctccccctgcctgggg
cctgcatccgctgccgggagcgggcttcgccgcggagccgaaagcatcttggcggcgccg
ccgccaccgcagccaggggcagtggctattggcagcgtcaggggacagagcaccggaaag
ggacccccacagtcgcctgtgtttgaaggtgtttacaataattccaggatgctgcatttc
ctgactgctgtggtgggttctacttgtgacgtaaaggtgaaaaatggcaccacttatgag
ggcattttcaaaactctgagctcaaagttcgaactggcagtagacgcagtacaccggaaa
gcatctgaaccagcaggtgggcctcggcgggaagacattgtagacaccatggtgtttaaa
ccaagtgatgttctgcttgtccacttccggaatgttgacttcaattatgctacaaaagac
aagttcactgactcagccatcgccatgaactctaaggtgaatggagaacacaaggagaag
gtgctacaacgttgggagggcggcgacagcaacagcgatgactacgatctggaatctgat
atgtccaatggatgggatcccaatgagatgttcaaatttaacgaagagaactatggcgta
aagaccacctatgatagcagtctatcttcttacacggttcccttggaaaaggacaactca
gaagagtttcggcagcgggagctgcgtgcagcccagttagctcgagagattgagtcaagt
ccccagtaccgcctacggattgccatggaaaatgatgatgggcgaacggaggaggagaag
cacagcgcagttcagcggcaggggtctgggcgggagagccccagcttggtgtccagggaa
gggaagtatatccctctgcctcaacgagttcgggaaggtccccggggaggagttcgatgc
agcggctctcgaggagggcgacctggccttagctctttgccaccccgtggacctcaccat
cttgacaatagcagccctggccctgggtctgaggcacgtggtatcaatggaggcccttcc
cgcatgtcccccaaggcacagcgccctttgagaggtgccaagactttatcttcgcccaac
aataggccttctggagaagcttctgttcctccagcacctgcagtgggccggatgtaccct
ccacgctctcccaagtctgctgcccccgccccagcctcagcttcctgtcctgagcctccc
attggttcagcagtagtgtcctctgcctccatccctgtgacatcatcagttgtggatcct
ggagcaggctctatttccccagcatctcccaaaatctccctggcccccacagatgttaaa
gaactcccaacaaaggagcccggtaggactttggaggcccaagagctggcccggatagct
gggaaagtccctgggcttcagaatgaacagaaacgatttcagttggaagaactgaggaag
tttggggcccagtttaagctgcaatctagtagctcccctgagaccggcctggatccattt
ccttcccggatcttaaaagaagaggccaaaggaaaggagaaggaggtggatggcctattg
acttcagatcccatgggatccccagtctcctccaagacagaatccatattggataaggaa
gacaaaccacccctggcagcagtagggggtactgaggggccagagcagctcccaccgtct
tgccccagccaaactggcagtcccccagtgggcctcatcaagggagatgacaaagaggag
ggccctgttactgaacaagtaaagaagtctactttgaaccccaatgccaaggagttcaat
ccaacaaagcctctgctgtctgtgaacaaatctactagtactccaacttcaccagggccc
cgtactcactcaacaccttctataccggtgctgacagcaggccagagtgggctctacagt
ccccagtacatctcatatatacctcagatccacatgggaccagctgtgcaggcacctcag
atgtatccatatcctgtttccaattcggtgcctgggcagcagggcaagtaccggggtgca
aaaggctcacttccccctcagcgctcagaccaacaccagccagcctcagcccctccgatg
atgcaggctgctgctgctgctgctggcccacccctagtggctgccacaccttattcctcc
tacatcccctacaacccacagcagttcccaggccagcctgccatgatgcagcccatggca
cactacccttcacagccggtgtttgcccctatgcttcaaagtaacccacgaatgttgaca
tcgggaagccacccccaggccattgtgtcatcctccactcctcagtacccctctgcagag
cagcccaccccccaagccctctatgccactgttcaccagtcctatccacaccatgccacg
cagctccatggccaccagccacagccggctaccacacctactgggagccagccacagtcc
cagcatgcggcccccagtcctgttcagcaccaggcggggcaggccccacacctgggcagt
ggacagccacagcagaatctgtaccatccaggggccctaacaggcacacctccttctcta
ccaccgggaccttctgcccagtcccctcagagcagctttccccagccagctgctgtgtat
gccatccatccccaccagcagctgccccacggcttcaccaacatggcccatgttacccag
gcccatgtccaaactggagtcacagcagccccgcccccacaccctggggcaccccacccg
ccccaggtgatgctgctgcaccccccccagggccatggggggcccccccaaggcgcggtg
cccccgagtggggtgcctgcactctcagcttccacaccctcaccctacccctacatcgga
cacccccaaggtgagcagcctggccaggcgcctggatttccaggaggagccgatgacagg
attcgtgagttctcgttagctgggggaatttggcatggaagagctgaggggctgcaggtg
gggcaggatgcacgggttctgggtggggattga
DBGET
integrated database retrieval system
