KEGG   Arvicola amphibius (Eurasian water vole): 119813615
Entry
119813615         CDS       T08327                                 
Name
(RefSeq) small nuclear ribonucleoprotein F-like
  KO
K11098  small nuclear ribonucleoprotein F
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119813615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aamp03019]
    119813615
   03041 Spliceosome [BR:aamp03041]
    119813615
   03032 DNA replication proteins [BR:aamp03032]
    119813615
Messenger RNA biogenesis [BR:aamp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     119813615
Spliceosome [BR:aamp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    119813615
  U2 snRNP components
    119813615
 Complex B
  U1 snRNP components
    119813615
  U4/U6.U5 tri-snRNP components
    119813615
 Complex C
  U2 snRNP components
    119813615
DNA replication proteins [BR:aamp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     119813615
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 119813615
NCBI-ProteinID: XP_038184922
LinkDB
Position
4:123178295..123178549
AA seq 84 aa
MSLPLNPRPFLDGLTGKPVMVKLQWGMEYKGYLVSVNGYMNMQIANTEKYIDGALSGHLG
EVLIKCNNVLYIRGIEEEEEDGEM
NT seq 255 nt   +upstreamnt  +downstreamnt
atgagtttacccctcaatcccaggccttttctcgatggactgacaggcaaaccagtgatg
gtgaaactccagtgggggatggaatataagggctacctggtctctgtcaatggctacatg
aacatgcagattgcaaatacagaaaaatacatagatggtgcgttgtctggacatctgggt
gaagttctaataaagtgtaataatgtcctttatatccgaggcattgaagaggaggaggaa
gatggggaaatgtga

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