Arvicola amphibius (Eurasian water vole): 119813696
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Entry
119813696 CDS
T08327
Symbol
Ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamp03009
]
119813696 (Ighmbp2)
03012 Translation factors [BR:
aamp03012
]
119813696 (Ighmbp2)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119813696 (Ighmbp2)
5.6.2.5 RNA 5'-3' helicase
119813696 (Ighmbp2)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
Other ribosome biogenesis factors
119813696 (Ighmbp2)
Translation factors [BR:
aamp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119813696 (Ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
ResIII
Viral_helicase1
zf-AN1
DEAD
nSTAND3
AAA_16
SLFN-g3_helicase
Helicase_RecD
UvrD-helicase
AAA_22
IstB_IS21
AAA_25
PhoH
Zot
Flavi_DEAD
DnaB_C
AAA
ABC_tran
UvrD_C_2
VWA_2
NTPase_1
NPHP3_N
DAP3
Motif
Other DBs
NCBI-GeneID:
119813696
NCBI-ProteinID:
XP_038185033
LinkDB
All DBs
Position
1:complement(147156600..147181787)
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AA seq
991 aa
AA seq
DB search
MASSTVESFVAQQLELLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQCTGLY
GQRLVTFEPRKFGPVVVLPSNSFTSGDIVGLYDANESSQLATGVLTRITQKSVTVAFDES
HDFQLNLDRENTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDVLLGGSTPSPTAE
IPPLTFYNTALDPSQQEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC
APSNIAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRRDID
QVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMVQSLTAADVVLATNTGASSDGPL
KLLPENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRS
LMERLAEKHGSAVVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVTNT
EETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHVQALVDAGVHASDIAVIAPY
NLQVDLLRQSLSSKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAV
TRARRHVAVICDSRTVNNHAFLKTLVNYFTEHGEVRTAFEYLDDIVPENYTHEGAQGHGR
TPKPRDPATSIKKPASEQESGQEARATAGQGRRKPSERQPGSQVHSQPSSSEGGSDRTGG
SEHTEHFRAVIEKFVASKESQLEFPTSLSSHDRLRVHQIAEEFGLRHDSSGEGKARHITV
SRKSPVSSGGVAPQPPSPPSPAQAESEPLAEQPLGQSHGPTQLDLKALHLERLRRQQGDQ
AQSVKAQPGVGSRPQKAPQKKKKKETKGPAPALPCEEDFDALVSAVVKADNTCSFSKCSA
STTTLGQFCIHCSHRYCLSHHLPEIHGCGEKARAHARQRISREGVLYAGSGTRDRALDPA
KRAQLQRRLDKKLGELSSQRTSKRKEKERGT
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtccaccgtggagagtttcgtggcccagcagctagagctgctggagctggag
agggacgccgaggtggaggagcgcaggtcctggcaggagcacagttcactgaaagagctc
cagagccgaggggtatgtttgctgaaactgcaggtatccagccagtgcaccgggctgtac
gggcagcgactggtcacctttgagcccagaaaattcgggcctgtggtggtgcttcccagc
aacagcttcacttctggtgatattgtgggtctatatgatgctaatgaaagcagccagctg
gctactggggttctgacccgcatcacccaaaagtcagtcacagtggcctttgatgagtcc
catgatttccagttgaacctggatcgagagaatacctacagactactgaagctcgccaac
gatgtcacctacaagcgactgaaaaaagcgctgatgacactgaagaagtaccactctggg
ccagcatcctcactcatagacgtccttttgggcggctccaccccaagtcctactgctgaa
atacccccactcactttctacaacacggccctggatccttcccagcaggaagctgtgtct
tttgcactggcccagaaagaacttgccatcatccacgggcctcctggcactgggaagact
acaaccgtggtggaaataatcctccaagctgtgaagcaaggcttaaaggttctgtgctgt
gctccctccaacatcgctgtggacaatctggtggagcggctagcgttgtgtaagaagcgg
attctgcgcctgggacaccccgcccgcctcctggagtccgctcagcagcactcactggac
gcggtgctagcgcgcagtgacaacgcccagattgttgctgacatcagaagggacatcgac
caggtctttggcaagaacaaaaagacccaggataagagagagaaaagtaattttcgaaat
gaaattaagctgctaaggaaggaactgaaggaaagagaagaagcagccatggtccagagc
ctcactgcagcagacgtggtcctagccaccaacacaggggcatcgtctgatggccctctg
aagttgctgcctgagaaccactttgatgtggttgtggtggacgagtgtgcccaggccctg
gaagccagctgttggatccccctgctgaaggctccaaagtgcatcctagccggagaccat
aaacagctgccacctaccaccgtctctcacaaggcagcactggctgggctgtcccgcagc
ctgatggagcgtctggcagagaagcatggttctgctgtggtaaggatgctgactgtacag
taccgaatgcaccaggccatcacacgctgggcctcggaggccatgtaccacgggcagctt
actgcccatccctctgtggcgggacacctcctgaaggacctcccaggtgtgactaacaca
gaggagacaagtgtccccctgctgctcatagacacagccggctgtgggctgttggagctg
gacgaggaggacagccagtccaagggaaacccaggcgaagttcgcctcgtcactttgcac
gtccaagcgctggtggatgctggggtccatgcaagtgacattgctgtcatcgcaccctac
aaccttcaggtggatctgctcaggcagagcctatccagcaagcaccccgaactcgagatt
aagtctgttgatggcttccaaggccgagagaaggaggctgtgatcctgacctttgtcagg
tccaacaggaaaggtgaagttggttttctagctgaggataggcggatcaatgtcgctgtc
acccgtgcccggcgtcacgtggccgtcatctgtgactcccgcactgtcaacaaccacgcc
tttttgaagaccctggtgaattatttcacagagcacggggaggtacgcacagcctttgag
tacctggacgacatcgtccctgagaactacactcatgagggtgcccagggccatggccgc
acccccaagcccagggaccctgccacctccatcaagaagcctgccagtgagcaggagagc
ggccaagaggccagagcaaccgccggacagggccgcaggaagccgagtgagaggcagcca
ggctctcaagtccactcccagcccagctccagtgaaggaggctctgacagaactggaggc
tcagagcacacagagcactttagggctgtgatcgagaagtttgtggccagcaaggagtcc
cagttggagttccccacatccctgagctcccatgacaggctgcgagttcaccagatagct
gaggagtttgggctgaggcacgacagttccggggaggggaaggcgcggcacattacagtg
agcaggaagagccctgtgagttctggtggtgtagccccacagcctccctcaccccccagc
cccgcgcaggctgagtctgagccattggcagaacagccccttgggcagtcacatggcccc
acacagctggatctgaaggccctgcatctggagaggctgcggagacagcagggcgaccaa
gcgcagtcagtcaaggctcagccaggtgtgggttcgagaccacagaaggctccacagaag
aaaaagaaaaaagaaacaaaaggtccagccccagctctgccctgcgaggaggacttcgat
gccctggtgtcagctgtggttaaggctgacaacacctgtagcttcagcaagtgttcggcc
agcaccaccacactgggccagttctgcatacactgtagccaccgctactgcctcagccat
cacctgcccgagatccacggctgcggtgaaaaggctcgcgcccatgcccggcagaggatc
agtcgtgaaggagtactctatgcaggcagcgggaccagggacagggccctggacccagcc
aagagggcccagctgcagaggaggctggacaagaaactgggcgagctcagtagccagagg
acaagcaagagaaaggagaaggagagggggacatga
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