Arvicola amphibius (Eurasian water vole): 119813999
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Entry
119813999 CDS
T08327
Symbol
Sorcs1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119813999 (Sorcs1)
Membrane trafficking [BR:
aamp04131
]
Protein recycling
Others
Others
119813999 (Sorcs1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
119813999
NCBI-ProteinID:
XP_038185165
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Position
1:complement(189855636..190360341)
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AA seq
1203 aa
AA seq
DB search
MGKVGAGGGSLARLSALLAGAGLLVLLAPSVRSSRSCCSSQHPGSTQRWTLTPRGFPHPG
PLGRAPATPPPLLMRPLFAVAPGDRALSLERSGGSRVSLTTAARSGRRRRSGADPVKTEP
GEGASRSRRGMLRDGGQQGPGTGARDPDKATRFRMEELKLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSA
EFGRRWQLIQESVVPNRFYWSVMASSKEPDLVHLEARTIDGHSQYLTCRMQNCTETNRNK
PFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRSTFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIENQVKTFITYNKGRDWRLLQAPDADLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGNTWRQIFEEEHSILYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGKYAGAMESEP
CVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTLIQVDFGDG
IAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHI
LVAVLPGLPTAAELFVLPYQDANRENKRSTEDLEQISEVLIHKLNQNLVHFELKPGVQVL
VHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKE
QELISPVSHTESRPSVPHPDLRWPGQLVDEKVEPQHLEVPNSNIESNGVLGSCSVFSRIP
TKH
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggcgccggcggcggctccctggccaggctgagcgcgctcctggcgggc
gcggggcttctggtgctcttagcccccagcgtccgcagcagccgctcctgctgctcctcg
cagcaccccggctcgacccaacgctggaccctgaccccaagaggttttcctcacccagga
ccgctgggtcgggctcctgccacgcccccgcccctcctcatgagacccctgttcgcagtg
gcccccggggaccgggcgctgtctctggagagatctgggggcagcagggtgtcactgaca
accgctgcacgctctggccgaaggagacggagtggagcggatcctgtgaagactgaaccc
ggagagggtgcgagtcggagccgccggggcatgctaagggatggagggcagcaagggcct
gggactggcgcgcgggacccggacaaagccactcgcttccggatggaggagctgaaactg
accagcaccacgtttgcgctgactggagactcggcacacaaccaggctatggtccactgg
tctggccacaacagcagcgtgattctcattttgacaaagttgtatgactataaccttggg
agcatcaccgagagctcactctggaggtcaaccgattatgggacaacctatgaaaagctg
aatgataaagtgggcttgaagacaattctgagctatctctatgtgtgtccaacaaacaag
cgtaagattatgttactcacggacccggagattgagagcagtttattgatcagctcagat
gaaggggcaacctatcaaaagtaccggctgaacttttacatccagagtttgctcttccat
ccgaagcaggaagactggattctggcatacagtcaagaccaaaagttgtacagctctgct
gaatttggcagaagatggcagcttatccaggaatctgtggttccaaataggttctactgg
tctgtgatggcgtctagcaaagaaccagaccttgtgcatcttgaggccaggaccatagat
ggacactcgcaatacctaacttgtcggatgcaaaactgcacagaaaccaacagaaataag
cctttccccggctacattgaccccgactctttgattgttcaggatgattatgtgtttgtt
cagctgacatccggaggaagaccgcattactacgtgtcctaccgaagaagcacgtttgca
caaatgaagctcccgaaatacgctttgcctaaggacatgcatgtcatcagcacagatgag
aaccaagtgtttgcagctgtccaagaatggaaccagaatgacacgtacaacctctacatc
tcggacacccgtggtgtctacttcaccctggccttggagaatgtccagagtagcagagga
cctgaaggcaacgtcatgattgacctctatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgaaaaccaagtgaagactttcatcacttacaacaaaggcagagac
tggcgtttgctgcaggctccagatgcagatctaagaggggaccctgtgcactgtttactg
ccttattgctcattacaccttcatctcaaggtctctgagaatccctacacctctggaatc
attgccagcagggacacagccccaagtattatagttgcttcaggtaatataggttctgaa
ctgtcagacagcgacatcagcatgtttgtctcttcagacgcagggaacacttggaggcag
atctttgaagaagagcacagcattttgtacttagatcaaggtggagtcctggttgctatg
aaacacacatctctcccaattcgtcacctttggttgagttttgatgaagggcgatcttgg
agtaaatacagtttcacatccattccactttttgtggatggagttctgggggagcctgga
gaagagacactaatcatgacagtgtttggacatttcagccaccgctccgaatggcagctt
gtcaaagtggattataagtccatttttgatagacgctgtgctgaagaagactacagacct
tggcagttacatagtcagggtgaagcatgcatcatgggagccaaaaggatatacaagaag
cgaaaatctgagcggaagtgtatgcaaggaaaatatgcaggagcgatggagtctgaacct
tgtgtttgtacagaggcagattttgactgtgactatggctatgagagacatagtaatggg
caatgcctgccagctttttggttcaacccatcctcactgtcaaaagactgcagcttggga
cagagctacctcaacagcactgggtataggaaagtggtctccaataactgcacggatgga
gtgagagagcagtatactgccaaaccacagaagtgcccagggaaggcccctcgagggctc
cggatcgtcactgcagacgggaaactgacagcagaacagggacacaatgtcacgctcatg
gtacagttggaagagggtgatgtgcagcggacactcatccaggtggactttggagatggc
attgcagtgtcttatgtcaacctcagctccatggaagatggaatcaagcatgtctatcag
aatgtgggcattttccgagtgaccgtgcaggtggacaacagtctggggtctgacagcgcc
gtcctgtacttacatgtaacttgtcccctggagcatgtgcacctgtcgctcccttttgtc
acaacgaagaacaaagaggtcaatgccactgcagtgctctggcccagccaagtgggcact
ctcacatacgtgtggtggtacggaaacaacacagagcccttgatcaccttggagggaagc
atatcattcaagtttacttctgaaggaatgaataccatcacagtgcaggtttcagctgga
aatgccatcctgcaagacacgaagaccatcgcagtctacgaggaattccggtctcttcgc
ttggccttttctccaaacttggatgactacaaccctgacatacctgagtggaggagggac
atcagccgagtcatcaaaaagtctctggtggaagccacagggattcccagccagcatatc
ctcgtggcagtgttacctggcttacccaccgctgctgaactctttgttttgccctaccaa
gatgcaaacagagaaaacaaaaggtcaacagaggacctggagcagatatctgaagttcta
atccacaaactcaaccaaaacttggtgcacttcgaactgaagcctggggtccaagttctc
gtccacgcagcccacctaacagcagcccccctggtggacctcactccaacccacagtgga
tctgccatgctgatgttgctctcagtcgtgtttgtgggtctggctgttttcgtcatctac
aagtttaaaaggaagatcccggggattaatgtttatgcccagatgcaaaatgagaaagaa
caggagctgatcagtccagtcagtcacactgaaagcaggcccagtgtccctcaccctgac
ctcaggtggcctggccaacttgtagatgagaaggtggaaccgcagcacctagaagttcca
aacagcaacattgaaagcaatggggtgcttggcagctgttctgtgttttccaggattcca
actaagcattga
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