Arvicola amphibius (Eurasian water vole): 119814047
Help
Entry
119814047 CDS
T08327
Symbol
Caprin1
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119814047 (Caprin1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119814047 (Caprin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
119814047
NCBI-ProteinID:
XP_038185229
LinkDB
All DBs
Position
5:71611716..71646243
Genome browser
AA seq
707 aa
AA seq
DB search
MPSATSHSGSGSKSSGPPPPSGPSGSEAAAGAAAPASQHPATGTGAVQTEAMKQILGVID
KKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQD
IQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEE
LSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKLLKEIVERVFQ
SSYFDSSHSHQNGLCEEEEATSAPTVEDQVAEAEPEPTEEYTEQSEVESTEYVNRQFMAE
TQFTSGEKEQVDEWAVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQSDPLVRRQRVQDL
MAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMEMPQLVCPPVHSESRLAQPNQ
VPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPMDQIQAAISLNTDQTTAAS
SLPAASQPQVFQTGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQ
ASYNQSFPSQPHQVEQTELQQDQLQTVVGTYHASQDQPHQVPGNHQQPPQQNSGFPRSSQ
PYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPRDY
SGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccagccacagcggaagcggcagcaagtcgtcgggaccgccgccgccg
tccgggccctccgggagtgaggcggcggccggggcagctgcgccggcttctcagcatccg
gcaaccggcaccggcgcggtccagaccgaagccatgaagcagattctcggggtgatcgac
aagaaacttcggaacctggagaaaaaaaagggaaagcttgatgattatcaggaacgaatg
aacaaaggggaaaggctcaatcaagatcagctggatgctgtatctaagtaccaggaagtc
acaaataatttggaatttgcaaaggaattacagaggagtttcatggcactaagtcaggat
attcagaaaaccataaagaagactgcacgtcgggagcagcttatgagagaagaagcagag
cagaagcgcttaaaaactgttcttgagttacagtacgtactggataaactgggagatgat
gaagtcagaacagatctgaaacaaggtttgaacggagtgccaatattgtctgaagaagaa
ctgtcattattagatgaattctacaagttagtagaccccgagcgggacatgagtttaagg
ttaaatgagcagtacgaacatgcctctattcacttgtgggacttgctggaagggaaagag
aagcctgtatgtggaacaacctataaattactaaaagaaattgttgagcgtgtttttcag
tcaagctactttgacagctctcacagtcatcagaatgggctgtgtgaggaggaagaggca
acctcagcacctacagtggaagaccaggtagctgaagcagaacctgagccaacagaagaa
tacacggagcaaagtgaggttgaatcaacagagtatgtcaatagacaattcatggcagaa
acacagttcaccagtggtgagaaggagcaagtagatgagtgggcagttgaaacagttgag
gtggtaaactcactccagcagcagcctcaggctgcatctccgtcagtaccagaaccccac
tctttgaccccagtggctcagtcagatccacttgtgagacggcagcgagttcaagatcta
atggcccaaatgcagggaccctataatttcatacaggattcaatgttggattttgaaaat
cagacgcttgatcctgccatagtttctgcacaacctatgaaccctacccaaaacatggaa
atgcctcagcttgtttgccctccggttcattctgaatctagacttgcccaacctaatcaa
gttcctgtacaaccagaagccacacaggttcctttggtttcgtccacaagtgaggggtat
acagcgtctcaacccttgtaccaaccttcgcatgctacagagcagcggccacaaaaggag
ccaatggatcagattcaggcagcaatatctctaaatacagaccagactacagcagcatca
tcccttccggctgcttctcagcctcaagtgttccagactgggacaagtaaacccttgcat
agcagcggaataaatgtaaatgcggctccattccaatccatgcaaacggtgttcaatatg
aatgccccagttcctcctgttaatgaaccagaaaccttgaaacaacagaatcagtaccag
gctagttacaatcagagttttcccagtcagcctcaccaagtggagcaaacagagcttcag
caagatcaactgcaaacggtggttggcacttaccatgcttcccaggaccagccccatcaa
gtgcctggcaaccaccagcagcccccccagcagaactctggctttccacgtagcagtcag
ccttactacaacagtcgtggagtgtcccgaggaggatctcgtggtgccagaggcttaatg
aatggatacaggggccctgccaatggatttagaggaggatatgatggttaccgcccttcg
ttctcaaacactccaaacagtggttatacacaatctcagttcagtgctccccgggactac
tctggctaccagcgggatggatatcagcagaatttcaagcgaggctctgggcagagtgga
ccacggggagccccacgaggtcgtggagggcccccaagacccaacagagggatgccgcaa
atgaacactcagcaagtgaattaa
DBGET
integrated database retrieval system
