Arvicola amphibius (Eurasian water vole): 119814258
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Entry
119814258 CDS
T08327
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04136
Autophagy - other
aamp04140
Autophagy - animal
aamp04211
Longevity regulating pathway
aamp05010
Alzheimer disease
aamp05014
Amyotrophic lateral sclerosis
aamp05016
Huntington disease
aamp05017
Spinocerebellar ataxia
aamp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119814258 (Atg13)
04136 Autophagy - other
119814258 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
119814258 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
119814258 (Atg13)
05014 Amyotrophic lateral sclerosis
119814258 (Atg13)
05016 Huntington disease
119814258 (Atg13)
05017 Spinocerebellar ataxia
119814258 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
119814258 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119814258 (Atg13)
03029 Mitochondrial biogenesis [BR:
aamp03029
]
119814258 (Atg13)
Membrane trafficking [BR:
aamp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119814258 (Atg13)
Atg1 complex
119814258 (Atg13)
Mitochondrial biogenesis [BR:
aamp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119814258 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
119814258
NCBI-ProteinID:
XP_038185721
LinkDB
All DBs
Position
5:83618754..83658452
Genome browser
AA seq
516 aa
AA seq
DB search
METDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKISTRSSSSPTGSDWFNLAIKDIPD
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPI
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTGEDAGVT
YPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAVLGLGSADLAYPVVFTAGLNTTHAHQL
MVPGKEGGVPLAPSQPAHGTQADQERPVTHTPSEGTHCAATPSSSEDTETVSNSSEGRAS
PHDVLETIFVRKVGAFVNKPINQVALTSLDIPFAMFAPKNLELEDADPMVNPPDSPETTS
PLHGSLHSEGSSGGSSGNPHDDFVVLDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSI
DIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcagttcccaggacagaaaggacctggacaagtttattaaatttttt
gcactcaagactgtccaagtaattgtccaggctcgacttggtgaaaagatttccacccgt
tcatcttcttcaccaacgggttctgattggttcaatttagcaatcaaagacatcccagat
gtcacccatgaagccaagaaggccctgtcagggcagctgcctgctgtggggcgctctatg
tgtgtggagatctcactcaagacctctgagggagattccatggagttggaaatttggtgt
cttgaaatgaatgaaaagtgtgacaaagaaatcaaagtttcctacactgtatacaacaga
ctgtcactgctgctgaagtctcttcttgctataacgagggtgacaccagcctacagactc
tcgagaaaacaagggcatgaatatgtaatattgtacaggatttattttggggaagttcaa
ctgaatggtttaggagaaggcttccagacagttcgagttggaacagtgggcacccctatc
ggcaccatcactctttcctgtgcttatagaattaatttggcattcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgttgaccgtccctac
cccagctcctctcccatgcacccttgcaattacagaactggtgaggatgctggagtcaca
tacccgtcagtggaagactctcaggaagtctgtaccacctccttttccacctcccctccc
tcccagctctcaagctctcgcctttcctatcagcctgctgtcctgggccttggatctgct
gacctggcttatccagtagtgtttactgctggcttaaacactacacacgctcaccagttg
atggttcctgggaaggaaggtggggtacctcttgctcccagccagcctgctcatggcacc
caggctgatcaggagagaccggtgactcacacaccttctgaggggacccactgtgctgcc
acgccatctagcagtgaggacactgagaccgtatctaacagcagtgagggacgggcctca
ccccatgatgtcttggagactatttttgtccgaaaagttggagcgtttgtcaacaaaccc
atcaaccaggtggccctgacaagtttggacataccctttgccatgtttgctcccaagaat
ttggagctggaggatgctgatcctatggtgaatcccccagactcaccagagaccacgtct
cctctccacggcagcctacactcggagggctccagcgggggcagcagtggcaatccacac
gacgactttgttgtgcttgactttaaacctgctttttctaaagatgacattcttccgatg
gacttggggaccttttaccgtgaatttcagaatccccctcagctgagcagcctctccata
gatattggagcccagtctatggcggaagacttggattctttaccggagaaactggctgtg
catgagaagaatgtccgagaatttgatgcctttgttgaaaccctgcagtaa
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