KEGG   Arvicola amphibius (Eurasian water vole): 119814299
Entry
119814299         CDS       T08327                                 
Symbol
Sdc4
Name
(RefSeq) syndecan-4 isoform X1
  KO
K16338  syndecan 4
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04512  ECM-receptor interaction
aamp04514  Cell adhesion molecule (CAM) interaction
aamp04820  Cytoskeleton in muscle cells
aamp05205  Proteoglycans in cancer
aamp05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119814299 (Sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    119814299 (Sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119814299 (Sdc4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    119814299 (Sdc4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    119814299 (Sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:aamp00535]
    119814299 (Sdc4)
Proteoglycans [BR:aamp00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   119814299 (Sdc4)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 119814299
NCBI-ProteinID: XP_038185782
LinkDB
Position
5:14155838..14174757
AA seq 211 aa
MEGQWAPNTHCVPEEALGQAGLELRDSPASVSRIRETEVIDPQDLLEGEYYSGDLPDDED
AGGLEQGSDDFELSGSGDLDGTQETKTSPEGIQPLVPLHNHIPERAQPGIRVPSETKELE
ENEVIPKRVSPSEVDGDISNKVSMSSTAQDSNIFERTEVLAALIVGGVVGILFAVFLILL
LVYRMKKKDEGSYDLGKKPIYKKAPTNEFYA
NT seq 636 nt   +upstreamnt  +downstreamnt
atggaagggcagtgggcacctaatacacactgtgttcctgaagaagctttaggccaggct
ggcctggaactcagagattcgcctgcctctgtctctcgaattcgagagactgaagtcata
gaccctcaggacctcctggaaggcgaatactactctggagacctccctgacgatgaagat
gctgggggcctcgagcagggttccgatgactttgagctgtccggctctggagatctggat
ggcacccaggagaccaagacctccccggaagggatacaacccttggtgcctctacacaac
cacattccggagagggcacagcctgggatccgtgtcccctcagaaaccaaggagctggag
gaaaatgaagtcattcccaaaagggtctccccctccgaagtggatggtgatatatccaac
aaagtgtccatgtccagcactgcgcaggacagcaacatttttgagagaaccgaggtcctg
gcagctctgattgtgggcggtgtggtgggcatcctcttcgccgtcttcctgatcctgctg
ctggtataccgaatgaagaagaaggacgaaggcagttacgacctgggcaagaaacccatc
tacaaaaaagcccccaccaacgagttctacgcgtga

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