Arvicola amphibius (Eurasian water vole): 119814367
Help
Entry
119814367 CDS
T08327
Symbol
Stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aamp01009
]
119814367 (Stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119814367 (Stau1)
Protein phosphatases and associated proteins [BR:
aamp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119814367 (Stau1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119814367 (Stau1)
mRNA cycle factors
Stress granule specific factors
119814367 (Stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
119814367
NCBI-ProteinID:
XP_038185928
LinkDB
All DBs
Position
5:11686972..11726625
Genome browser
AA seq
495 aa
AA seq
DB search
MYKPVDPHSRMQSTYSYGMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAV
KHDATARALRTLQNEPLPERLEMNGRESEEENLNKSEISQVFEIALKRNLPVNFESFPLT
QVARESGPPHMKNFVTRVSVGEFVGEGEGKSKKISKKNAARAVLEQLRRLPPLPSVERVK
PRIKKKSQPACKLQTAPDYGQGMNPISRLAQIQQAKKEKEPEYVLLTERGLPRRREFVMQ
VKVGNHTAEGAGTNKKVAKRNAAENMLEILGFKVPQAQPAKPALKSEEKTPVKKPGDGRK
VTFFEPSHGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFTRA
APNPAKATVTAMIARELLYGGTSPTAETILKSNISSGHVPHGPRTRPSEQLYYLSRAQGF
QVEYKDFPKNNKNECVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQSTE
MPRTGNGPVSACGRC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtataagcctgtggacccccactctcggatgcagtccacctacagctacggaatgcgt
ggaggcgcctatccccccaggtacttttacccatttcctgttccgccgttactctaccaa
gttgagctttccgtgggaggacagcagtttaacgggaaaggaaagacgagacaagctgtg
aagcacgatgctaccgccagagcattgaggactctgcagaacgagcctctaccagagagg
ctggagatgaatggaagagaatcagaagaggaaaacctcaataaatcagaaataagccaa
gtgtttgaaatcgcactgaagcggaatttgcctgtgaattttgagtctttccctctgaca
caggtggcccgggagagtggcccaccccacatgaagaactttgtgaccagggtttcagtc
ggggagtttgtaggggaaggagagggcaaaagcaagaagatctccaagaagaatgcagca
agggccgtgctggagcagctgaggaggctgccacctctgccttctgtggagcgggtgaag
cccagaatcaagaagaaaagtcagcctgcatgcaagctacagacagccccggattatggc
caggggatgaatcctattagcagactggcacagattcagcaggccaaaaaggaaaaggag
ccggagtacgtgctccttacagagcgaggccttccacgtcgcagggagtttgtgatgcag
gtaaaggttgggaatcacactgcagaaggagcgggtaccaataagaaggtggccaaacgc
aatgctgccgagaacatgctggagatcctggggttcaaagttccccaggcgcagcctgcc
aagccagcactcaaatcagaagagaagaccccagtaaagaaaccaggagacggaaggaaa
gtaacgttttttgaacctagccatggggatgaaaatggaactagtaataaggaggatgag
ttcaggatgccttatcttagccatcagcagctgccagctggaatcctccccatggtgccg
gaggttgcccaggctgttggggttagtcaaggacaccacaccaaagatttcaccagggca
gctccgaatcctgccaaggccacggtaactgccatgatagctcgcgagttgttgtacggg
ggcacctcgcccacagccgagaccattttaaagagtaacatctcttcaggccacgtaccc
catggacctcgcacaagaccctctgagcaactatactacctttccagagcccagggattc
caggttgaatacaaagacttccccaagaacaacaagaacgaatgtgtctctctcatcaat
tgctcctcgcagccgcccctcatcagccatggcattggcaaggatgtggagtcttgtcat
gacatggctgcattgaacattttaaagttgctgtctgagctggaccaacagagcacagag
atgccgagaacaggaaatggaccagtgtcagcgtgtgggaggtgctga
DBGET
integrated database retrieval system
