Arvicola amphibius (Eurasian water vole): 119814387
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Entry
119814387 CDS
T08327
Symbol
Capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119814387 (Capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamp01002
]
119814387 (Capn3)
Enzymes [BR:
aamp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
119814387 (Capn3)
Peptidases and inhibitors [BR:
aamp01002
]
Cysteine peptidases
Family C2: calpain family
119814387 (Capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
119814387
NCBI-ProteinID:
XP_038185961
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All DBs
Position
5:complement(55152623..55204612)
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AA seq
764 aa
AA seq
DB search
MPTAISATVAPRTGAEPRSPGPGPRSPGPGPHPAQGKTTEAGGGHPGGIYSAIISRNFPI
IGVKEKTFEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFII
GGANRTDICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFVENYAGIFHFQFWRYGDW
VDVVIDDCLPTYNNQLVFTKSNHLNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTG
GVTEFFEIKDAPSDMYKIMRKAIERGSLMGCSIDTIVPVQYETRMACGLVKGHAYSVTGL
EEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKDEKDRLQHQVTEDGEFWMSY
EDFVYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYR
LKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQ
KDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLS
EEAENAISVDRPVARPGHTDQETEEQQQFRNIFRQIAGDDMEICADELKNVLNTVVNKRE
GLMPDAGDGQGPQLSEGSSSPFSIPPDKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEF
HHLWKKIKAWQKIFKHYDADHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNI
DFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgccattagtgcgactgtggccccgaggacaggggctgagcctaggtcccca
ggacctgggcccaggtccccagggcctgggcctcacccagcacaaggaaagaccactgag
gctgggggtggacacccaggtggcatctattcagccatcatcagccgcaatttcccaatt
attggagtgaaagagaagacctttgagcagctccacaagaagtgcctggagaagaaagtt
ctctatctggatcccgagttcccgccagatgagacctctctcttttacagccagaagttc
cccatccagttcgtctggaagagacctccggaaatttgtgagaatccccgatttatcatc
ggtggagccaacaggactgacatctgccaaggagatctaggggactgctggtttcttgca
gccattgcctgcctgaccctgaacgagcgactgcttttccgagttataccccatgatcaa
agttttgttgaaaactatgcggggatcttccacttccagttctggcgctatggagactgg
gtagatgtggtcattgatgactgtctgccaacatacaacaatcagctggttttcaccaaa
tccaaccacctcaatgagttctggagcgccctgctggagaaggcttacgctaagctccat
ggttcctatgaagctctaaaaggtgggaacaccaccgaggccatggaggacttcacggga
ggggtgacggagttttttgagatcaaggacgctcccagtgacatgtacaagatcatgcga
aaggccatcgagagaggttccctcatgggctgctccatcgatacaattgttcctgtgcag
tatgagacgagaatggcctgtgggctggtcaaaggtcatgcctattcggtcaccgggctg
gaggaggccctgttcaaaggcgagaaggtgaagctggtgcggctgcggaacccctggggc
caggtggagtggaatggctcttggagtgatggctggaaggactggagctttgtggacaaa
gatgaaaaggaccgtctccagcaccaggttactgaagatggagagttctggatgtcatac
gaagactttgtctaccatttcacaaagctagagatctgtaacctcacagcggatgccctg
gagtctgacaagctccagacctggacggtgtctgtaaacgagggtcgctgggtgaggggc
tgttcagccggaggctgccgcaacttcccagacactttctggaccaacccgcagtaccgt
ctaaagctcctagaggaggatgatgaccccgatgactctgaggtgatctgcagcttcctg
gtggctctgatgcagaagaaccggcgcaaggaccggaagctgggagccaacctcttcacc
attggctttgcaatctacgaggttcccaaagagatgcatgggaataagcaacacctacag
aaggactttttcttgtacaacgcctccaaggccagaagcaaaacctatatcaacatgcgg
gaagtgtcccagcgcttccgcctgccccccagcgagtacgtcattgtgccttccacctac
gagccccatcaggagggggagttcatcctccgggtcttctctgagaagaggaatctctct
gaggaagctgaaaacgcaatctctgtggatcggccagtggcacggcctggccacacagac
caggagactgaggagcagcaacagttccggaacatcttcaggcagatcgcaggagacgac
atggagatatgtgcagatgaactcaagaacgtccttaacacagtggtgaacaaacgtgag
ggactcatgccagatgcgggggatgggcaggggccacagctgtctgaaggcagctcctca
cccttctccatccccccagacaaggacctgaagacacaagggttcaccctggagtcttgc
cgaagcatgatagctctcatggatacagatggctctgggaggctgaatctgcaggagttc
catcacctctggaaaaagatcaaggcctggcagaaaatcttcaaacactatgacgcagac
cattccggcaccatcaatagctatgagatgcgaaacgcagtcaacgatgcaggcttccac
ctcaacagccaactctatgatatcatcaccatgcgctatgcagacaaacacatgaacatc
gactttgacagtttcatctgctgcttcgtcaggctggaagggatgttcagagcgttcaat
gcattcgacaaggatggagatggcatcatcaaattgaatgttcttgagtggctgcagctt
accatgtatgcctga
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