Arvicola amphibius (Eurasian water vole): 119814528
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Entry
119814528 CDS
T08327
Symbol
Rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119814528 (Rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119814528 (Rbm22)
Spliceosome [BR:
aamp03041
]
Complex B
Other components
Prp19-related factors
119814528 (Rbm22)
Complex C
119814528 (Rbm22)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
119814528
NCBI-ProteinID:
XP_038186289
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All DBs
Position
5:135067657..135079819
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AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctgggttccaacacctacaacaggcaaaactgggaggacgcggacttc
cccatactgtgtcagacgtgtcttggagaaaacccttacatacgaatgaccaaagaaaaa
tatggaaaagagtgcaaaatctgtgccagaccattcacagtgtttcgttggtgccctggg
gtccgcatgcgcttcaagaagactgaagtgtgccaaacctgcagtaaattgaagaacgtt
tgtcagacctgcctgttagacctcgagtatggcctacccatccaagttcgtgatgcagga
ttgtcatttaaagatgacatgcccaaatcagatgtcaacaaagaatattacacacagaat
atggaaagagaaatttctaactctgatggaacacgaccagttggcatgctggggaaagct
acatccaccagtgacatgctgctcaaattggcccggaccacaccgtactacaaaaggaat
cggccccacatttgttccttctgggtgaaaggagagtgtaagagaggagaagagtgtcca
tatagacatgagaagcctaccgatccagatgaccctcttgctgatcagaatataaaagac
cggtactatggaattaatgaccctgtagccgataagctgctaaagcgggcttcaaccatg
cctcgtctagacccaccagaggataagaccattaccacactatatgtgggtggtctggga
gacaccattactgaaacagatctcagaaatcacttctaccagttcggagagatccgcacg
attacagttgtgcagaggcagcagtgtgccttcatccagtttgccaccaggcaggctgct
gaggtggctgctgagaagtccttcaataagctcatcgtgaatggccgcaggctcaatgtg
aagtggggaagatcccaagcagccagaggaaaagaaaaagagaaggacggaaccacagac
tccgggatcaagctagagcctgtcccagggcttcctggagctctaccacctcctcctgct
gcagaagaggaggcatctgccaactacttcaacctgcccccaagtggccctccagcagtg
gtgaacattgccctgcccccaccccctggaatcgccccacccccacccccaggttttgga
ccacatatgttccacccaatgggaccgccgcctcctttcatgagggctcccggaccaatc
cactacccttctcaggaccctcaaaggatgggagctcatgctgggaaacacagcagcccc
tag
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