Arvicola amphibius (Eurasian water vole): 119814529
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Entry
119814529 CDS
T08327
Name
(RefSeq) protocadherin beta-6-like isoform X1
KO
K16494
protocadherin beta
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119814529
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Protocadherins
119814529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
119814529
NCBI-ProteinID:
XP_038186290
LinkDB
All DBs
Position
5:114409611..114418101
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AA seq
796 aa
AA seq
DB search
MEAALAKTPEKRQVIFIVMLLLLWEAGSEAIRYSMPEETKSGYLLANLAKDLGLRVGELA
TRGARIHHRGNKELLQLDADTGNLLLKKTPDREELCGATEPCVLHFQLILENPVQFFQTD
LQLTDINDHSPEFPHREMLLKIPESAQPGTVFPLKAAQDPDIGSNAVQNYTVSANLHFHV
VTHSRADGRKYPELVLDRALDREEQPELTLTLTAVDGGSPPRSGTTTVHIEVVDINDNAP
QFVQSLYEVQVPENRPLGTLVVAVSARDLDVGPYGNVAYSLFQGGEVSQPFVIDQVTGEI
RLKGALDFEETPYYNMEIVATDSGGFSGKCSVAIQVLDVNDNAPKLTISSLTTSIPENAP
ETVVAVFSVSDPDSGDNGRMVCSIRNDLHFLLKPTFENYYTLVTEGPLDRESRAEYNITI
TVTDMGTPRLTTQHTITVQVSDVNDNAPAFTQSSYTLFIQENNSPALHIGTISATDSDSG
SNAHITYSLLPTHDPNLALSSLISINADNGQLFALRALDYEALQTFEFHVGATDQGSPAL
SGQALVRVQVLDTNDNAPFVLYPLQNASAPFTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPPQSASVTLHVL
LVDGFSQPFLPLPEVASNPANDDDVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRARAS
TLGDYSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPMIPQLFPQDPG
RESKESPHCRESFVFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagctctagcaaaaacgccagagaaaaggcaagtcatttttattgttatgttg
ttgcttttgtgggaggctggttcggaagcaattagatattccatgccagaagaaaccaag
agtggatatttgctggctaatctggcaaaagatttggggctcagggtgggggaattggcc
actagaggggcacgaattcatcatagaggaaacaaagagctcttgcagctggatgctgac
accgggaatttgctcctgaagaaaacaccagaccgcgaggagctgtgtggggcgacagaa
ccctgtgtgctgcacttccagctcatactggaaaaccctgtgcagttcttccaaactgat
ctgcagctcacagacataaacgaccattctccagaatttccccacagggaaatgctccta
aaaatcccggaaagcgcccagccaggcactgtgtttcctctgaaggcggctcaggaccct
gacataggcagcaatgctgttcagaactacacagtcagcgccaacctccacttccatgta
gttactcacagtcgtgctgatggcaggaaatacccagagctggtgctggacagagccctg
gacagggaggagcagcctgagctcactttaaccctcactgctgtggatggagggtctcct
cccaggtctggcaccaccacagttcacattgaggtcgtggacattaatgataacgctccc
cagtttgtacagtcgctctatgaagttcaggtccctgagaacaggcccctgggtacctta
gttgtggcagtttctgccagggatttagatgtgggaccttatgggaatgtagcctactct
ctgtttcaaggtggtgaagtttctcaaccatttgtaatagaccaagtcacgggagaaatt
cgccttaaaggggcattggattttgaggaaactccctattataacatggaaattgtagca
acagacagtggtggcttttcaggaaaatgcagtgtagctatacaggtgctggatgtgaat
gacaacgcccctaaactcaccatatcttcgctcactacttccatcccagaaaatgctcct
gaaactgtagtcgctgttttcagtgtttctgacccagattctggggacaatggaaggatg
gtgtgttctattcggaacgatcttcattttcttttgaagcccacattcgagaactactac
actttagtgacagaggggccattggacagagagagcagagctgagtacaacatcaccatt
acagtcaccgacatgggcacacccaggctcacaacccagcacaccataacagtgcaggtc
tctgacgtcaacgacaacgcccccgccttcacacaaagctcctacaccctgtttatccag
gagaacaacagccctgccctgcacataggcaccatcagcgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgcccacccatgacccgaacctggctctctcc
tcgctcatctctatcaatgccgacaatgggcagctgttcgcactcagggcgctggactac
gaggccctgcagaccttcgagttccacgtgggtgccacagaccaaggctcgccggcgctc
agtggccaggcgctggtgcgcgtgcaggtgctggacaccaacgacaatgcgcccttcgtg
ctctacccgctgcagaacgcctctgcgcccttcacagagctgttgcccagggcggcggag
ccaggctacctggtcaccaaggtggtggctgtggaccgagactctggccaaaatgcctgg
ctgtcgttccagctgctgaaggccacggagccagggctgttcagcgtgtgggctcacaat
ggcgaggtgcgcacctccaggctgctgagtgagcgcgatgctcccaagcacaggctgctg
ctgctggtcaaggacaatggcgatcctccgcagtcggccagtgtcactctgcatgtgctg
ctagtggatggcttttctcagcccttcctgcctctgcccgaggtggcgagcaaccctgcg
aacgacgatgacgtgctcaccctctatttggtcattgccttggcatctgtgtcttcgctc
ttcctcttgtctgtgctgctgtttgtgggggtgaggctgtgcaggagggccagggcgtct
actctgggtgactactctgtgcctgagggacactttcctggccacttggtggatgtcagc
ggcacggggaccctgtcacagagctaccagtatgaggtgtgtctgactggggattctggg
actggtgagttcaaattcctcaaacccatgatcccccagctgttccctcaggatcctggg
agagaaagtaaggaaagtccccactgcagggagagctttgtattcagttaa
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