Arvicola amphibius (Eurasian water vole): 119814573
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Entry
119814573 CDS
T08327
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119814573
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Protocadherins
119814573
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
119814573
NCBI-ProteinID:
XP_038186370
LinkDB
All DBs
Position
5:114438230..114440617
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AA seq
795 aa
AA seq
DB search
MPQTKAWCQTRQVMFLIAWMLSWEVGSESIHYTVLEETESGTFVANLTKDLGLRVGELAA
RGARVVFKGNRQYLKLDPQTQDLVLNEKLDREELCGSTEPCMLHFQVLLNNPVRFYQAAL
RVIDINDHAPEFPAREVLLKISEMAETGKILPLKMAQDPDTGSHSIQSYTVSDNRHFHVL
TRNRSDGKKFPELVLDKALDREEQAQLRLTLTAVDGGSPPRSGTTEIQILVLDINDNTPE
FAQELYEVQVPENNPIGTLLLTVTARDLDTGSFGEVSYALFQDDDVNEPFVINSKTGEIR
LRSALDFEAFQSYHVGVEAVDGGGLTGKCSLVVQVLDVNDNAPEVILSSLNSPIPENLPG
IVVAVFSVSDADSENNQEVMCSIDDGLPFILRPSMENFYTLETDRALDRESRAEYNITIT
VTDMGTPRLTTQHTITVQVSDVNDNAPAFTQSSYTLFVQENNSPALHIGTISATDSDSGS
NAHITYWLLPTHDPQLDLASLISINADNGQLFALRALDYEALKTFEFRVGATDQGSPALS
SQALVRVLMQDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWL
SFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPPRSASVTLHVLV
VDGFSQPYLPLPEVARDPAQDDDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARASA
LGGCSLPEGHFPGHLVDINGTGTLSQSYQYEVCLGGDSGTGEFKFLKAINPQFPALESER
KTEESPTLRNSFLFI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaaaggcgtggtgccagacaaggcaagtgatgtttttaattgcatggatg
ctttcgtgggaggtgggttcagaatcaattcactataccgtgctggaggagacagaaagt
ggcacgtttgtggccaatttgactaaggacttgggactaagggtgggagaactggctgct
aggggcgccagagtggttttcaaggggaacagacagtatttgaagcttgacccacaaacc
caggatttggtgctgaatgaaaagctggaccgggaagagctgtgtggctccacggagccc
tgtatgctacatttccaggtgttactaaacaatcctgtgcggttttatcaggcggcactg
agagttatagatataaacgaccacgccccagagtttcctgccagagaggtactccttaaa
atatcagaaatggctgagacaggaaagatactccctttgaaaatggcccaggacccagat
accggcagccacagcattcagagctacactgtcagcgacaaccgtcacttccacgtgctc
actcgcaaccgcagcgatggcaagaagttccccgagctagtgttggacaaggcattggac
cgtgaggagcaggctcagctcagactaacgctcactgcggtggatggcgggtctcccccc
aggtcagggaccacagagattcaaatacttgtcttagatataaatgacaacactccagag
tttgctcaggagctctatgaggtccaggtccctgagaacaaccccattggcacactgctt
cttaccgtcacagcgagagatttagacacaggctccttcggagaggtttcttatgcactg
tttcaagatgacgatgttaacgagccttttgtaataaactcaaagacgggagaaattcga
ctgaggagcgccttggattttgaagcatttcagtcctaccatgtgggtgttgaggccgtg
gatggcggtgggctaacaggaaagtgctctttagttgtgcaggtattggatgtgaatgac
aatgctccggaagtgatcctatcctccctcaacagccccatccctgaaaatttgccaggt
atcgtagtagcagtgttcagcgtttcagatgcagactcggaaaataaccaggaggttatg
tgttccatagatgacggtcttccatttattctaagaccatccatggagaatttctatact
ttggaaacagatagggcactagacagagagagcagagctgagtacaacatcaccattaca
gtcaccgacatgggcacacccaggctcacaacccagcacaccataacagtgcaggtctct
gacgtcaacgacaacgcccccgcctttacacaaagctcctacaccctgtttgtccaagag
aacaacagccccgccctgcacataggcaccatcagcgccacagactcagactcaggctcc
aatgcccacatcacctactggctgctgcccactcacgacccacagctggatctcgcctcg
ctcatctccatcaatgctgacaacgggcagctgttcgcgctcagggcgctggactacgag
gccctaaagaccttcgagttccgcgtgggcgccacagaccaaggctcgcctgcactcagc
agccaggcgctggtgcgcgtgctgatgcaggacgccaacgacaatgcgcccttcgtgctc
taccctctgcagaatgcctctgcgccctgcacagagctgctgcccagggcggcagagcca
ggctatctggtaaccaaggtggtggctgtggatcgagactctggccagaatgcctggctg
tcgttccagctgctcaaggccacggagcccggactgttcagtgtgtgggctcacaatggc
gaggtgcgcacctccaggctgctgagtgagcgcgatgcccccaagcacaggctgcttctg
ctggtcaaggacaatggcgatcctccgcggtctgccagtgtcactcttcatgtgctggtg
gttgatggcttctctcagccctacctgcctctgcccgaggtggcacgcgaccccgcccaa
gatgacgatgcactcacgctgtacctggtcattgccttggcgtctgtgtcttcgctcttc
ctcttgtctgtgctgctgttcgtgggggtgaggctgtgcagaagagccagggcatctgct
ctgggtggctgctctttgcctgagggccactttcctggtcacctggtggatatcaatggc
acaggaaccctgtcacagagctaccagtatgaggtgtgcctggggggagactctgggact
ggtgagttcaaatttctaaaggcaattaacccccaatttcctgctttggaatctgagagg
aaaacagaggaaagtcctacacttcggaatagcttccttttcatctaa
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