Arvicola amphibius (Eurasian water vole): 119814584
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Entry
119814584 CDS
T08327
Symbol
Nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119814584 (Nphp1)
Cilium and associated proteins [BR:
aamp03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
119814584 (Nphp1)
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
CENP-B_dimeris
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
119814584
NCBI-ProteinID:
XP_038186385
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All DBs
Position
5:47964853..48020315
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AA seq
680 aa
AA seq
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MLSRRPRDPLQALRRRGQELKLQVDSLVTESQLTGALEPSKRRDIYQRCILLKQAVDENK
NALQKLSKADESAPVGNYEKRKEEEYGLLEKLTCQLQELAVGVSKKDTLKDEAHSDKEDE
DLTEEDEETGGEEEESEGDEEEKQEQASPKQGEIVTYFALGDFAAQQAGDLTFKKGDILH
IIDKKPDGWWLAQDAEGNEGLIPRTYLEPYNKKDKRESSEEGSKEGSEEDLEVEDETANG
AEVKQSTDSHWSAVRKALSEQINTADMLATMGAIPAGFRPSMLAQLLDEGNRFQASYFLQ
PELTTSQLAFKDLLWDAKAGTIMSRLSRVSLILTLWSCKMIPLPGTSIQVLSRHVRLCLF
DGSKVLSNIHTVRAVWQPKKPKTWTFSPQVAGILPCLLDGDCFIRSNSSTPDLGILFELG
ISYIRNSTGERGELSCGWVFLKLFDASGFPIPAKTYELFLNGGTPYEKGIEVDPSVSRRA
QGSVFRQMISMRRQPQLLVKLRSLNWRSRAMLSLLPETLVGSMCSAHLLIFYRQILGDVL
LRDRTNLQSADVISHPVLATFPMLLEQPDVMDALRSSWAEKESTLKRSEKRDQELLKAEF
LLVYHDCVLPLLHSTLLPPFKWAEEETEAARWKAIADFLKQSRENEGSLKALLSPDGVHK
PFDLSEQTYDFLGQMRKTSA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccggcggccgcgggacccgctgcaggcgctaaggcgccgcgggcaggaacta
aagctgcaggttgatagtttggttactgaaagccaactgacaggtgctctggaaccaagt
aaaagaagagatatttaccaaagatgtatcctgttaaaacaggcagtagatgaaaataaa
aatgctcttcaaaaattaagcaaggctgatgaatctgcacctgtcgggaactatgagaag
agaaaggaggaggagtacggtcttctggagaagctgacctgccagctgcaggagcttgct
gtgggcgtcagcaagaaggacactctcaaagatgaggcacacagtgacaaagaggatgag
gacttgactgaagaagatgaagaaacaggtggagaggaagaagaatcagaaggagacgag
gaagaaaagcaggaacaagcctcccccaaacaaggagaaatcgttacgtactttgctctt
ggggacttcgctgctcagcaagcaggggacctgacatttaagaaaggggatattctccac
ataatcgacaaaaagcctgatggttggtggttggcccaggatgctgaaggaaatgagggt
ctcattcccagaacctacttggagccctataataaaaaagacaagcgagaatcgagtgaa
gaaggcagcaaggagggcagcgaagaggacttggaggtggaggatgaaactgcgaacgga
gccgaagtaaagcagagcactgattctcactggagtgctgttcggaaagctctctccgag
cagataaacacggctgatatgttagccaccatgggagctattcctgcagggttccggcct
tccatgctcgcccagctgctggatgaagggaaccggtttcaagcaagctacttcttacag
ccggagctcacgacatcgcagctggccttcaaagatctactgtgggatgctaaggcaggc
acgattatgtcaagactaagtcgtgtgtctttgattctgaccctctggagctgtaaaatg
attcctctcccaggaacaagcatacaggttctcagtagacatgtgcgcctctgtctgttc
gatggtagtaaggttctgagcaacatccatacagtccgagcagtctggcagcctaaaaag
cccaaaacatggaccttttctccccaggtcgctggcatcctgccatgcttgctcgatggt
gactgtttcatcaggtccaattcttcaactccagaccttgggatattatttgaacttgga
atttcttatattcgcaattccactggtgagagaggagagttaagctgtggctgggtattt
ctgaagcttttcgatgccagcggatttcctattccagcaaaaacatatgaactcttcttg
aatggtggcactccttatgaaaaaggcattgaagtggacccctcggtgtccagaagagcc
cagggcagtgtgttccgtcagatgataagcatgcggaggcagcctcagctgctggtgaaa
ctgcgctctctgaactggaggtcaagggccatgctcagcctgctgcccgaaacattggtg
gggagcatgtgctccgctcacttgctgatattttatcgacaaattcttggagatgtgctc
ctgagagacaggacaaacctgcagagcgctgatgtaattagtcatccagtgctggccacc
ttccctatgctcctggagcagcccgacgtgatggatgctctcaggagttcatgggccgag
aaagaaagcacactaaaacgatcagaaaagagagaccaggagctcctgaaggccgagttc
cttctcgtctaccatgactgtgtgctccctcttctgcattcgacactgctgcccccgttc
aagtgggccgaagaggagacagaggctgcgcggtggaaagccatcgctgacttcctcaag
cagagcagagagaacgagggctccctgaaggctctgctgtcaccagacggggtccacaaa
ccatttgacctttcagagcagacctatgacttcctggggcaaatgagaaagacctcagcc
tga
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