Arvicola amphibius (Eurasian water vole): 119814630
Help
Entry
119814630 CDS
T08327
Symbol
Taf4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03022
Basal transcription factors
aamp05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119814630 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
119814630 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119814630 (Taf4)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119814630 (Taf4)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119814630 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
119814630 (Taf4)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119814630 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
119814630
NCBI-ProteinID:
XP_038186457
LinkDB
All DBs
Position
5:1950948..2013063
Genome browser
AA seq
1046 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPSCGPRPAGALGN
HVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRHPGSGLPRRLLVPAGPA
PAPAKLRPPPEASAGPARPPPPPPAAAAAAGPDPAARRTPPPPRPPAPAASKPWPAWPAR
PGAAQTLNGIAAXAHREPHAAPAVSPVHNGPAPPPAAGSVIQAAPRRPRPPRPSPPAAPS
PAAPPPPRPAPAPAAPALPPGHPAAPAPPLSPAAAAAAQNGAAPAPAAASGGAPRGLGQP
GAGAQXGPSAEAPKPVPGTGPAAAAAAAAAAGVAAGGAAGGVLLGPAMPGALPGPAPGTP
AGLAKGAAAATPSLPRTAAATTGAIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLV
RSENGQLLMIPQQALAQMQAHAQAQPQSTMAPRPATPTGAPPVQISTVQAPGTPIIARQV
TPTTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLGGSAQTASLGTATAVQTGTPQRTVPG
ASTASTAATETMENVKKCKSFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFT
SRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPPASQATTALTAVVLS
SSVQRTAGKTAASVTSALQPPVISLTQPTQVGVGKQAPPTPLVIQQPPKPGALIRPPQVT
LTQTPMVALRQPHNRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNK
LKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQ
RRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASD
VRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQM
RQRDANLTALAAIGPRKKRKVDCAGPGPGAEGSGPGAAVPGSSGVGTPRQFTRQRITRVN
LRDLIFCLENERETSHSLLLYKAFLK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgatctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgccgagctgcgggccgcggccagccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcctccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggtggg
ggcccgcggcacccgggctccggcttaccgcgccgcttgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcgggccctgcccggccgccg
ccgccaccgcccgccgccgccgccgccgcggggcccgatcccgccgcccgccgcacgccg
ccgccgccccgcccgccggccccggccgcctccaagccctggcccgcctggcccgcccgc
cccggcgccgcgcaaactttgaatgggatcgccgcgnncgcccaccgcgagccgcacgcc
gcacctgctgtcagcccggtccacaacgggcccgcgccgccgcccgccgccggctctgtc
atccaggcggccccccgccgcccgcgcccgccgcgcccatcgccgcccgccgcgccctcg
cccgccgcgcccccgccgccgcgcccggccccagcgcccgccgcgccagccctgccgccc
gggcaccccgccgcgcccgcgccccccttgtcacccgccgccgccgccgccgcgcagaac
ggggccgctcctgcccccgccgcggcctccgggggggctccgcgggggctgggacagccg
ggcgcgggcgcgcagngggggccaagtgccgaggcgcccaagcccgtgcccgggaccggg
ccggcggcggcggcggcggcggcggcggcggcgggggtcgcggccgggggcgcggcgggt
ggcgtgctgctcgggcccgccatgccgggcgcgctgccggggcctgcgcccgggaccccc
gcggggctggcaaagggcgcggccgcggcgacccccagtctgcctcggacggcggcggcc
accactggcgctatccgggccacgctgacgcccaccgtactggccccgcgtctgccgcag
ccgccgcagaacccgacgaacatccagaacttccagctgcccccaggaatggtccttgtg
cggagtgagaatgggcagttgttaatgatccctcagcaggccctggcccagatgcaggcc
catgctcaggcccaacctcagagcaccatggcaccccgtcctgcaacccccacaggtgct
ccacctgtccagatctccaccgtgcaggctccaggaacacctattattgcacggcaggtg
accccaactaccataattaagcaagtgtctcaggcccagacgacggtacagcccactaca
accctacagcgatctcctggggtacagcctcagctggttctgggtggttctgcacagaca
gcctcgcttggaacggccacagctgttcagacagggacacctcaacgcacagtccccggg
gccagcaccgcctccacagctgccacggaaactatggaaaatgtgaagaaatgtaaaagt
tttctatctacattaataaaactggcttcttctggtaaacagtccacggagacggcggct
aatgtgaaagaattagtacaaaacttgctggatgggaaaatcgaagcagaagatttcact
agcaggttatatcgagaattgaactcttcacctcaaccttaccttgtgcctttcctgaag
aggagcttacctgccttgagacagctgaccccagactctgcggccttcatccagcagagc
cagcagcagcaaccacctgcctcgcaggccactactgcactcacggctgtggtgctgagc
agctcggtgcagcgcacagctgggaaaacggctgcctcggtgaccagcgccctccagccc
ccagtcatcagcctcacgcagcccacacaggttggcgttggcaagcaggcaccgcccaca
ccactggtgatccagcagcccccgaagcctggagccttgatccggcccccgcaggtgacc
ttgacgcagacacccatggtcgcattgcggcagcctcacaaccggatcatgctcaccaca
ccacagcagatccaactgaaccagctgcagccagtccctgtggtgaaacccaccgtgtta
cctggaaccaaagccctttctactgtttctgcacaagcagctgctgcacagaaaaacaag
ctcaaggagccagggggaggctcctttcgggatgacgatgacatcaacgatgttgcatca
atggctggggtgaacctgtctgaagaaagtgcaagaatattggccacaaactctgagttg
gtggggacactgactcggtcctgtaaagacgacaccttcctcctccccgcacctttgcag
aggaggatactggaaataggtaaaaagcacggcatcacggaactccatccagatgtagtg
agttatgtgtctcatgccacacagcaaaggctgcagaatcttgtagaaaaaatatctgaa
acagctcagcagaaaaacttctcttataaggatgatgacagatatgagcaagcaagtgat
gttcgggctcagctaaaattttttgaacagcttgatcagattgaaaagcagaggaaagat
gagcaggagagggagatcttgatgcgagcagccaagtctcgatccagacaggaagacccc
gagcagttaaggttgaagcagaaagcaaaagagatgcagcaacaggagctggcacagatg
cgacagcgagatgccaacctcactgcgttagcggctattgggccccggaagaagaggaaa
gtggactgtgctgggccgggaccgggagcagagggctcaggcccaggcgcagcggtccca
ggcagctccggtgtgggaacccccagacagttcacacggcaaagaatcacgcgggtcaac
ctcagggacctcatattttgtttagaaaacgagcgtgagacaagccattcactgttgctc
tacaaagcattccttaagtaa
DBGET
integrated database retrieval system
