Arvicola amphibius (Eurasian water vole): 119814699
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Entry
119814699 CDS
T08327
Symbol
Cdh4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119814699 (Cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119814699 (Cdh4)
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Major cadherins
119814699 (Cdh4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_3
Stevor
Cytomega_TRL10
Cadherin_4
RIFIN
Motif
Other DBs
NCBI-GeneID:
119814699
NCBI-ProteinID:
XP_038186598
LinkDB
All DBs
Position
5:complement(2031046..2502053)
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AA seq
921 aa
AA seq
DB search
MDKSWDYHKAASSKDLPRKEETVGDWCHPRVSDSLLKLGIHVSILAVTPSVSWLQRCLSE
DPMYIKFSSCLGTKGTQYETNSLDFKVGADGTVFATRKLKIPSEQVAFTVTARERQTAEQ
WDAMVRLLVAQTSSPHSGHKKGKTAALDPSQSPKDTLLPWPQHQSSGGLRRQKRDWVIPP
INVPENSRGPFPQQLVRIRSDKDNDIPIRYSITGVGADQPPMEVFSIDSMSGRMYVTRPM
DREERASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPDFINQVYNGSVDEGSKPGTY
VMTVTANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQY
TVIVQATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTFAGEVPENRVETVVANLTV
LDRDQPHSPNWNAVYRIISGDPSGHFIVRTDPVTNEGMVTVVKAVDYELNRAFMLTVMVS
NQAPLASGIQMSFQSTAGVTISVTDVNEAPYFPSNHKLIRLEEGVPTGTALTTFSAVDPD
RFMQQAVRYSKLSDPANWLHINTSNGQITTAAVLDRESLYTKNNVYEATFLAADNGIPPA
SGTGTLQIYLIDINDNAPQLLPKEAQICERPGLNAINITAADADMDPNIGPYVFELPFIP
TTVRKNWTITRLNGDYAQLSLRILYLEAGMYDVPIIVTDSGNPPLSNTSIIKVKVCPCDE
NGDCTTIGAVAAAGLGTGAIVAILICIVILLIMVLLFVVWMKRREKERHTKQLLIDPEDD
VRDNILKYDEEGGGEEDQDYDLSQLQQPEAMEHVLSKAPGVRRVDERPVGAEPQYPVRPV
VPHPGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLDSSSSGDQDYDY
LNDWGPRFKKLADMYGGGEED
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagctgggactatcacaaggcagcaagcagcaaagacctccctagaaaagaa
gaaacagttggtgactggtgccatcccagagtaagtgactcgctgctaaagttgggcata
catgtgtctatactggctgtcacaccatctgtctcctggcttcagagatgtctgagtgaa
gaccccatgtacatcaagttcagcagctgcttgggtaccaaagggacgcagtatgaaacc
aacagcttggacttcaaagtcggggcggatgggacagtcttcgccacccggaagctgaag
atcccctcagagcaggtggccttcactgtgactgcgcgggaacgccagactgctgagcag
tgggacgccatggtgcggctgctggtagcccagacttcatccccacactctggacacaag
aaaggaaagacagcggccctggacccctctcagtccccgaaggacacactgctgccgtgg
ccccagcaccagagctctggaggactgaggaggcagaagcgtgactgggtcatcccgccc
atcaacgtgccggagaactcccgtgggcccttcccccagcagctcgtcaggatcagatct
gacaaggacaatgacattcccatccggtacagcatcacgggtgtgggagccgaccagccc
cctatggaggtcttcagcattgactccatgtctggcaggatgtatgtcacccggcccatg
gaccgagaggaaagagcctcttaccatctccgagcccatgcggtggacatgaacggcaac
aaggtggagaatcctattgatctgtatatttatgtcatcgacatgaatgacaaccgtccc
gacttcatcaaccaggtctacaacggctctgtggatgagggctccaagccaggcacatac
gtgatgaccgtgacagccaacgacgcagacgacagcactacggccaacggcatggtgcgg
taccggattgtcacccagacaccccagagcccctcccagaacatgttcaccatcaacagt
gaaactggggacatcgtgacagtggcagcaggcctggaccgggagaaagtccagcagtac
acggtcatcgtccaggccactgacatggaaggaaaccttaactatggtctctcgaacaca
gccactgccatcatcacagtgacagacgtaaatgacaaccctccggaattcaccacgagc
acatttgcaggagaagtccctgagaatcgtgtggagacagtagtagccaatctcacggta
ctggaccgagatcagccccactcacccaactggaacgcagtctaccgaatcatcagtggg
gacccctcggggcacttcattgtccgcacagaccccgtcaccaatgagggcatggtcacc
gtggtgaaggcagtggactacgagctgaaccgcgccttcatgctgactgtaatggtgtcc
aaccaggcgcccctggccagcgggatccagatgtctttccagtccacagcaggggtgacc
atctctgtcactgatgtcaacgaggccccctactttccctccaaccacaaactgatccgc
ctggaagagggtgtgcccaccggcactgcgcttaccactttttccgcggtggaccctgac
cggttcatgcagcaagctgtgaggtactcaaagctgtctgatcccgccaactggctgcac
atcaacacatccaatgggcagatcaccacggccgcagtcctagaccgagagtcactgtac
accaagaacaatgtatacgaggccaccttcctggctgctgacaatgggatccccccagcc
agtggcactgggaccctgcagatctacctcattgacatcaatgacaatgcaccacagctg
ctgcccaaggaggcgcagatctgcgagaggccaggcctcaacgccatcaacatcactgca
gccgatgccgacatggaccccaacatcggcccctacgtctttgagttgcctttcatcccc
actacagtgaggaagaactggaccatcacccgcctaaacggtgactacgcccagctcagt
ttgcgcattctgtacctggaggcagggatgtatgacgtccccatcattgtcacggactct
ggaaaccctcccctgtccaacacgtccatcataaaagtcaaggtgtgcccgtgtgacgag
aatggtgactgcaccaccatcggtgccgtggctgcagccggcctgggcacgggcgccatc
gtggctatcctcatctgcatcgtgatcctgctaatcatggtcctgttgttcgttgtgtgg
atgaagcggagggaaaaggaacgacacacaaagcagctgctcatcgaccctgaggacgat
gtgcgtgacaacatcctgaagtacgacgaggaaggaggtggcgaggaggaccaggactat
gacctcagccagctacaacagccggaagccatggagcatgtgctgagcaaggcccctggt
gtgcggcgggtggatgaacggccagtaggtgccgagccccagtacccagtcaggcctgtg
gtgccccacccaggcgacatcggagacttcatcaatgagggacttcgagctgctgacaat
gaccccacggcacccccctatgactctctgctagtcttcgactatgagggcagtggttct
actgcaggctccgtcagttccctggactcctccagctccggggatcaagattacgactac
ttgaatgactgggggccccggttcaagaagctggcggacatgtatgggggtggcgaggag
gactag
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