Arvicola amphibius (Eurasian water vole): 119814760
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Entry
119814760 CDS
T08327
Symbol
Lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamp03016
]
119814760 (Lcmt2)
Enzymes [BR:
aamp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
119814760 (Lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
119814760 (Lcmt2)
Transfer RNA biogenesis [BR:
aamp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119814760 (Lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_5
Kelch_6
Kelch_3
Kelch_1
Motif
Other DBs
NCBI-GeneID:
119814760
NCBI-ProteinID:
XP_038186718
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All DBs
Position
5:54454216..54457682
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AA seq
686 aa
AA seq
DB search
MGPRSRERRAGTVQSTNDSSALSKRSLAAHGYVRDAFAALLVPGPVRRTPLIHRGYYVRA
RAVRHCVRAFLQRTGALPDPTRAQILSLGAGSDSLYFRLKAAGLLARTAVWEVDFPDVSR
RKAERIREIPELCSLTGPFQLGDSSSALCFESSDYRILGADLRELPQLGETLDCAGLDAT
APTLLLAEAVLTYLEPAEAAALIAWAAQRFPDALFVIYEQMKPRDAFGQIMLQHFRRLHS
PLHGLELFPDVEAQVRRFLQAGWTACNALDLNEFYRRLLPTDERRRVETLEPFDEFEEWH
LKCAHYFILAASRGDTLSGTPVLPPPEASFWVDPVLPSGFLSARPVTSDQHSSLKRYGHA
SVLLSPGIIFSAGGFGEEEGRRHCRVSTFHLLWRSRDSEWKGSQISTLGTGGQWDGRLYH
TMTRLSDTQVLVLGGRLSPVTPASGALQLELYRSEPNCPESQTVTVTEAAMEEGPMLSCW
RHSTTEVYYQNQRYLLVYGGRSVVEPVLSDCRFLHIETMAWVRIPVEGAAPEGRHSHSAC
GWQGGALIAGGLGASEEPLSSVLFLRPKSSGFLWESIDIQPPITPRYSHTAHVFHGKLLL
VGGVWIHSSSVPGVTVIDLSTGLSSEYPLDTTSVPWPVMLHSHCSALLPEEQQILLTGGG
GNCFSFGTYFNPHTVALDLSSLSTGQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcgaagccgcgagcgccgggcgggaaccgtgcagagcaccaacgacagcagc
gccctcagcaagcgatcgctggccgcacacggatacgtgcgcgacgccttcgcggcgctg
ctggtcccgggacctgtgcggcgcacgccgctgatccaccgcggctattacgtgcgcgcc
cgcgccgtgcgtcactgcgtgcgcgccttcctccagcgcactggcgcgctcccggacccg
acccgggcgcagattctgtctttgggtgcaggttccgactcgctgtactttcgcctgaag
gctgcgggcctcctggcccggactgctgtttgggaggtggacttcccagacgtgtcccgg
cgcaaggcggagaggatcagggagatcccggagctgtgctcgctgaccggccctttccag
ctcggggactcgtcctccgctctgtgcttcgagagctccgactaccgcatcctgggcgcg
gacctgcgtgagctcccgcagttaggcgagaccctggactgcgcgggcctggacgccacc
gcacccacgctgctcctggccgaggcggtgctcacctacctggagcccgccgaagccgcg
gccctcatcgcctgggccgcccagcgtttccccgacgcccttttcgtaatctatgagcag
atgaagccgcgagacgcctttgggcaaattatgctgcagcactttcggcgactgcactct
cccctgcacggcctggagctctttcccgacgtggaggcccaggtacggcgctttcttcaa
gctggctggactgcctgcaacgccctggacctgaacgagttctaccgccgtcttctcccc
accgacgagcgtcggcgggtcgagacgctcgagccctttgatgagtttgaggagtggcat
ctgaagtgtgcccactatttcatcctggcagcatctaggggagacacgctatcgggaact
ccggtgttgccacccccagaggcatctttttgggtagatcctgttttgccttcaggtttt
ctttctgccagaccagtcactagtgaccagcactccagcctgaagagatatggccacgcc
tctgtcctcttgagccctggcattattttcagtgcaggaggctttggggaagaagagggg
aggagacactgccgagtgagcacgtttcacttgctctggagatcccgtgactctgaatgg
aaaggcagccaaataagtactttggggactggaggccagtgggatggacgcctttatcac
accatgacaaggctttcagatactcaggttctggttcttggagggagactgtccccagtt
actccagcttccggggctctccaacttgaattatacagaagtgagcctaattgccccgag
agtcagactgtaacagtaacagaggctgccatggaagaaggtcccatgttgtcatgttgg
cggcattcaacaacggaagtatactaccagaatcaaagatacttacttgtgtatggtggc
cgaagtgtggtggaacctgtactaagtgactgtcgtttcctacatatagagacaatggct
tgggtccgaatcccagtagaaggggcagctcccgaaggtcggcattcccatagtgcctgc
ggttggcaaggaggagcgcttatcgccggaggtcttggggcttctgaagaaccactgagc
tctgtactgtttcttagaccaaagtcctctggattcctctgggaatcaatagacatccag
ccccccattaccccaagatactctcacacggctcatgtatttcatgggaagctgcttctg
gttggaggggtctggattcattcctcctctgttcctggagtgactgttatcgacttgagt
accgggttgagctctgagtatccgctcgacacgacatctgtgccctggccggtcatgctg
cacagccactgcagtgccctcctccccgaagagcagcagatcctgctgacgggaggggga
ggcaactgcttttccttcggcacttatttcaacccccacacagtggcattagatctttct
tccttaagtacaggccaataa
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