Arvicola amphibius (Eurasian water vole): 119814796
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Entry
119814796 CDS
T08327
Symbol
Vsx1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119814796 (Vsx1)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119814796 (Vsx1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119814796
NCBI-ProteinID:
XP_038186780
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All DBs
Position
5:complement(26988248..26994771)
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AA seq
366 aa
AA seq
DB search
MTGRDVLSDGRSKSRALAPGCPTGSRLRSFAINDLLGLEADLPTPAGPELGSSCETAGEP
AGPGPALCGSCPARGALPLGLGLFCGFGAQSPSAVAARARCLLLADLRLLPPAGPEPAVV
QSPVRPSPAIGRQQRSESVSTSDGDSPSEEKSDLKMPSAPGKRKKRRHRTVFTAHQLEEL
EKAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYG
AMVRHCIPLPDSVLNSADSLQGSCAPWLLGMHRKSTGMKKPESEDKLAGLWGFDHLKEGA
NKGQDGLERGPGNTSLNPEDSLEDVAIDLSSSSRQETKKMSPGSSAQGCSHAPGQQVLQP
PKVGAS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgactggacgggacgtactttcggatgggcgctctaagagtagagccctggcgccaggc
tgtcccaccggctctcgccttcgaagcttcgccatcaacgacttgctgggtttggaagcg
gacttgcctactccagcggggcccgagttaggatccagctgtgaaactgcaggggagccc
gcggggcccgggccagcactctgcggttcttgccctgcccgcggggctcttccgctgggg
ctgggcctcttctgcggcttcggggcgcaatccccctccgcggtcgctgctcgtgcgcgc
tgcctgcttctcgccgatctgaggcttcttccacccgcgggacccgagcctgccgtcgtc
cagagccccgtccgcccgtcgcctgcgatcggccgccagcagcgcagcgagagcgtctcc
acgtcggatggggacagtccatctgaagaaaagagtgatctgaagatgccttctgccccg
ggcaagaggaagaagcggaggcacaggacagttttcactgcccatcaactagaagaactg
gagaaggcatttggtgaggctcactaccctgatgtgtatgcccgggaaatgctggctgtg
aaaacggagctccctgaagaccgaatacaggtctggttccagaaccggagggccaagtgg
cgcaagcgagagaagcgctggggcggcagcagcgtgatggctgagtacggactctatggg
gccatggtgcgccattgcatcccactgccagattccgtgctcaactccgcggacagcctg
cagggctcctgtgcgccctggcttttggggatgcatagaaagtctacagggatgaagaaa
ccagaaagtgaagacaagttggcaggactctggggcttcgaccacctcaaggaaggtgct
aataagggtcaggatggacttgaaaggggcccaggcaacacgagcctgaaccctgaggac
agcttggaagatgttgccattgacctgtccagctcttctaggcaggagacaaagaaaatg
tccccagggtccagtgctcaggggtgttcccatgccccagggcagcaggtgctccagccc
ccaaaggtgggagcctcatga
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