Arvicola amphibius (Eurasian water vole): 119814826
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Entry
119814826 CDS
T08327
Symbol
Dsc1
Name
(RefSeq) desmocollin-1
KO
K07600
desmocollin 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119814826 (Dsc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119814826 (Dsc1)
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Major cadherins
119814826 (Dsc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_pro
CADH_Y-type_LIR
RET_CLD1
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
119814826
NCBI-ProteinID:
XP_038186812
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All DBs
Position
5:complement(97985287..98017314)
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AA seq
895 aa
AA seq
DB search
MAVASAAPGSTFSKQLLFSLLVLVLFCDACQKISLQVPAHLKAETLVGKVNLDECLKSAS
LILSSDPAFRVLDDGTIFTTHDLLLSTEQRRFSIFLSDSQRQEQKEIEIELSAREKKVFR
KRHTEDPVHKRSKRRWAPIPCSLMENSLGPFPQHVQQIQSDAAQNYTIFYSISGPGVDKE
PFNLFYIEKDTGDIYCTRSIDREQYDQFLVYGYATTADGYAPDYPLPLLFKVEDDNDNAP
YFETKLTVFSVPENCRTGTSVGQVTAIDNDEPGTLHTRLRFKILQQIPDHPRHFSIHPDT
GVITTTSPLLDREKCDTYKLVMEVRDMGGQPFGLFNTGTITISLEDENDNSPYFTQTSYT
TEVEENRIDVEILRMTVQDQDLPGTPHSKAVYSILQGNENGNFRITTDPNTNEGVLCVIK
PLNYEASRQVILQIGVLNEAQFSKAANGQTPTMCTTTVTVKIKDSDEGPECQPPVKVIQS
KDGLPAGQELLGYKAMDPETSSSDGIRYQKVGDEDNWFEINESTGNLKTLKILDRESKFV
KNNQYNISVVAMDAVGRSCTGTLVVLLEDFNDHPPQVDKDLTICQQEKDYAVLEPVDLDG
PDNGPPFQFFLDNSASKLWTLEPQDGKRAILRQRHNLNYDYYSVPIQIQDRHGVSAKHML
SVRVCDCTVPSECRMSAKEERDIKPKVILGKWAILSMVLGSALLLCILFTCFCVTTTKRT
VKKCFPDDVAQQNLIVSNTEGPGEEVTEANIRLPAQTFCDTSTSVGTLGGQGIKTQQNFE
MVKGGYTLESNKGGGHHTLESNKGGVLGTADTGRYAYTDWQSFTQPRLGEKVYLCGQDEE
HKHCEDYVRSYHYEGKGSMAGSVGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVKK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctccgctgccccagggagcaccttctctaagcagctccttttctctctc
ctggttctggtgttattttgcgatgcctgtcaaaaaatttctcttcaagttcctgctcat
cttaaggctgaaacacttgtaggcaaagtgaatctggacgagtgcctcaaatcagccagc
ctgatcctgtccagtgacccagccttcagagttctagacgacggcacaatctttacaaca
catgacctgctcttgtccactgaacagaggaggttctccatcttcctatcagacagtcag
aggcaggagcaaaaggaaatagaaattgaactgtcagcaagagaaaaaaaggtatttagg
aagagacataccgaagacccagtgcacaaacgcagtaagaggagatgggctccaattccg
tgttcgctgatggagaactcattaggtccattcccacaacacgttcaacagattcaatct
gacgctgcccagaattataccatcttttactccatcagtggaccaggggtggacaaagag
cctttcaatttgttttacatagagaaagacactggggacatctattgcaccaggagcatt
gaccgtgagcagtatgatcaatttttggtgtatggatacgcaaccactgctgacggctat
gctccagattatcctctccccttgctgttcaaggttgaagatgacaatgacaatgcccca
tattttgaaaccaaactgacagtttttagtgtgcctgaaaattgccgaactggaacttca
gtaggacaagtgactgccatagacaacgatgagccgggaaccctacacactcgtttgaga
ttcaaaatcctacaacaaatcccagatcacccaaggcacttctccatacacccagacaca
ggtgtgatcactaccacctcacctttactggacagagagaaatgtgatacttacaagcta
gtgatggaagttcgagatatgggtggccagccctttggtctattcaatacaggaacaata
acaatctcactggaggatgaaaacgacaattcaccgtatttcacccaaacttcttatact
acagaagtagaagaaaacagaattgatgttgagattctaaggatgacagtccaagaccaa
gatttgcctggcacccctcactccaaagcagtgtactcaattctccaagggaatgaaaat
gggaacttcagaatcacaacagacccgaacacaaatgaaggagttctgtgtgttatcaag
ccactgaactatgaggccagtcgccaagtcattctgcaaatcggtgtccttaatgaagcc
cagttctctaaagctgccaatggacagacccccacaatgtgcaccacgactgtgactgtg
aaaattaaagacagtgatgagggccccgagtgccagccaccagtcaaagtcatccagagc
aaagacgggctgccagccggccaagagctcttgggctacaaagccatggacccagaaaca
agcagctctgacggcataaggtatcagaaggtaggagatgaagataactggtttgaaatt
aatgaaagcaccggaaacttgaaaaccctaaaaatactagacagagaatcaaagtttgtg
aaaaacaaccagtacaatatttcagtagtggcgatggatgcagttggccggtcctgcacg
ggaacactggtagttcttctggaagattttaatgatcacccaccacaggttgacaaagac
ctgaccatttgtcagcaggagaaggattatgctgttctggagcctgttgacctagatggg
cctgataatggtccaccttttcagtttttcttggataattctgccagcaaactttggact
ctagaaccacaggatgggaaacgtgccattcttcgccagcgacacaatctcaattatgac
tattattccgtgccaatccaaatacaagatagacatggtgtctctgcaaagcatatgctc
tcagtgagagtgtgtgactgtacagttccctcagagtgtagaatgagtgctaaggaggaa
agggacattaaaccaaaagtaatccttgggaaatgggccattctctccatggtcctgggc
tccgcactgctactgtgtattctgtttacatgtttctgtgtgactactacgaagagaaca
gtcaaaaaatgcttccccgatgatgtggcccagcaaaatttaattgtatcaaataccgaa
gggccgggagaggaagtgacggaggcaaatattagactccccgcacaaacattctgtgat
acaagcacatctgttgggactcttggtggccaaggaatcaaaacacaacaaaattttgag
atggtcaaaggaggctacactttggagtccaacaaaggaggtggccaccacaccttggag
tccaacaagggaggtgtgctgggaacagcagacactggccgatacgcatacactgactgg
caaagtttcactcaaccccggcttggtgaaaaggtgtatctgtgtggacaagacgaggaa
cacaagcattgtgaagattacgtccgttcgtatcactatgaaggcaaaggctccatggcc
ggctctgtgggctgttgcagtgatcggcaggaggaagaagggctggagtttttagatcac
ttggaaccaaaatttaggacattagcaaagacatgtgtgaagaaataa
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