Arvicola amphibius (Eurasian water vole): 119814875
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Entry
119814875 CDS
T08327
Symbol
Sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119814875 (Sema6d)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119814875
NCBI-ProteinID:
XP_038186884
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Position
5:complement(51050712..51106061)
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AA seq
1072 aa
AA seq
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MSFFLLWFCVLFLLASRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGVPTVIGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIEVDRAAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNQAKCGAE
SEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLSRCERYGACKKSCIASRDPYCGWLSQGV
CERVTIGMLAGGYEQDVEYGNTAHLGDCHESLPTSTTPDYQIFGGPTSDMEVSSSSVATV
ASSPEITSKVVDTWRPKLTSSRKFVAQDDPYTSDFTDTISGIPRGVRWEVQSGDSNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYSNLLTSRKELPPNADTKSMVMEHRGQPPELAALPTPESTPVL
HQKTLQAMKSHSDKAHGHGASRREHPQCFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTS
FSNSNAHKAEKKLQNLDHPLTKSSKREHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGEIH
MAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQ
RGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHL
QPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRPLNKYTY
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctttctgctatggttctgcgtgctgttccttctggcctccaggttacgggcg
gtcagcttccctgaagacgacgagccccttaacactgtggattatcactattcaaggcaa
tatccggttttcagaggacgcccttcaggcaacgaatcgcagcataggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagagatcaagtctatacagtg
aacttaaatgaaatccccaaaacagaggtcataccaagcaagaagctgacgtggaggtcc
agacaacaggatcgagaaaactgcgctatgaaaggcaagcataaagatgagtgccacaac
ttcatcaaagtctttgttccaagaaacgatgagatggtttttgtctgtggtaccaatgct
ttcaacccgatgtgtagatactataggttgaataccttagagtatgatggggaagaaatt
agcggcctggcacgatgcccatttgatgctagacaaaccaatgttgccctttttgctgat
gggaagctgtattctgccacagtggctgacttcctggccagtgatgctgtcatttacaga
agcatgggggatggatctgcccttcgcacaataaaatatgattccaaatggatcaaagaa
ccacactttcttcatgccatcgaatatggaaactatgtctatttcttcttccgagaaatc
gctgtggaacacaataacttgggcaaggctgtgtattcccgcgtggctcgcatttgtaag
aacgacatgggtggctcacagcgggtcctggagaaacactggacttccttcctgaaggct
cggcttaactgctctgtccccggagattcctttttctatttcgacgtcctgcagtccatc
acagacataatacaaatcaatggtgtccccaccgtgattggggtcttcaccacgcagctc
aacagcattcccggctctgcagtctgtgcctttagcatggacgacattgagaaagtgttc
aaagggcgattcaaagaacagaaaacccccgactctgtttggacggcagttcctgaagac
aaagtaccaaaaccaaggcctggctgttgtgccaaacacggcctcgcggaagcttacaaa
acctccatcgacttcccagatgagaccctgtctttcatcaaatcccatcccttgatggac
tctgctgttccacccattgctgatgagccctggttcacaaagacacgggtcaggtacagg
ttgacggccatcgaagtggaccgtgcagcagggccctaccagaactacacagtcatcttc
gttggctctgaagctggtgtggtgcttaaagtattggcgaagaccagtcctttctctttg
aatgacagtgtattgcttgaagagattgaagcgtacaaccaggccaagtgcggcgctgag
agcgaggaggacaggaaggtcgtctcgttgcagctggacaaagatcaccatgctttatac
gtggccttctccagctgtgttgtgcgcatccccctcagccgctgtgagcgctatggagcc
tgtaaaaagtcctgcattgcctcacgggacccgtactgtggctggttaagccagggcgtt
tgtgagagagtgaccataggaatgctcgccggaggatatgagcaggacgtggagtacggc
aacacggcccacctaggggactgccacgaaagtttgcctacttcaactacaccagattac
caaatatttggcggtccaacatctgacatggaggtatcttcatcttctgttgccactgtg
gcaagtagcccagaaattacatctaaagtggttgatacctggagacctaaactgacgagc
tcccggaaatttgtagctcaagatgacccatacacttctgattttactgatactatatca
ggtatcccaaggggtgtacggtgggaagtccaatctggagactccaaccagatggtccat
atgaacgtgctcatcacctgtgtgtttgccgctttcgtcctgggtgcgttcattgctggc
gtggctgtctactgctaccgcgacatgtttgttcgcaagaacagaaagatccataaagac
gccgaatcggcccagtcatgcacagactccagtggaagctttgccaagctgaacggcctc
tttgacagtcccgtcaaggaataccaacagaacattgattctcctaaactctatagcaac
ctgctgaccagtcggaaggagctgccacccaacgcagatacgaaatctatggtcatggag
catcgaggccagcctccagagctggctgctctccccacacccgagtccacacctgtgctc
caccagaagaccctgcaggccatgaagagccactctgacaaggcccatggccacggtgct
tcgaggagagaacacccccagtgttttccttccagtcctccaccccactccccgttaagc
cacgggcacatccccagtgctattgttcttccaaacgccactcatgactacaacacgtca
ttttcaaactctaatgctcacaaagccgaaaagaagcttcagaacctcgaccaccctctt
acaaagtccagtaagagggagcaccggcgttctgtggattccagaaacacccttaacgac
ctcctgaagcatctgaatgacccaaacagtaatcccaaagccatcatgggagagatccat
atggcgcatcaaaccctcatgctggaccccgtaggacctatgtctgaggtcccacccaag
gtccctaaccgggaggcatctctgtactctcctccttcaacactccccagaaatagtcca
accaagagagtcgatgtccctaccactcccggggtcccaatgacatctctggaaagacaa
aggggttatcataaaaattcctcccagaggcactctatatcagctgtgcctaaaaactta
aactcaccaaatggtgttttgttatccagacagccgagtatgaaccgtggagggtatatg
cccactcccacgggggcgaaggtggactacattcaggggacacccgtgagtgtccatctt
cagccttccctctctagacagagcagctacaccagtaatggcaccctacccaggacggga
ctaaagaggacaccatccttaaaacctgatgtgccaccaaagccttcctttgttcctcaa
accacatcggtcagaccactgaacaaatacacttactag
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