Arvicola amphibius (Eurasian water vole): 119814921
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Entry
119814921 CDS
T08327
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119814921 (Ctcfl)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119814921 (Ctcfl)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119814921 (Ctcfl)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119814921 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_15
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
Zn_ribbon_8
zf-C2HE
GAGA
zf-LYAR
Caerin_1
DUF7129
Motif
Other DBs
NCBI-GeneID:
119814921
NCBI-ProteinID:
XP_038186946
LinkDB
All DBs
Position
5:5728109..5751239
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AA seq
656 aa
AA seq
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MAAAEVPVPSESFTQIKEQKLKPGDQEKEKEEGGVQRMEAQECTVEVEAEFCQLLDAGPQ
KDQPELPSWVPVESDRRILTLQTLHLTSQDVHLQGLGCLSVPHSEGFPVMMPQAESFVPL
PSVLWLEQEPQPSLQHCVAISIPEELCPPEELEGMHFHLLWEAVPVAEEDRELMPDLGEG
AALMKFEDDEKDQLLSEGGPDKEGEERYLLVEVAPEDEGKDEIVLTISHLNLEEQQDQPA
PNQTSAPKAAATKPPRKAKGKPRTFQCDVCLFTSSKFSTFTRHKKIHNDERPHLCHLCLK
AFRTVTLLRNHVNTHTGTKPYKCGDCDMAFVTSGELVRHRRYKHTYEKPFKCSMCKYASV
EASKLKRHIRSHTGERPFKCYQCTYASKDTYKLKRHMRIHSGEKPYECPTCHARFTQSGT
LKIHVVQKHGENVPKHVCPHCATVIARKSDLRVHLRNLHSHSPVEIKCRYCPAGFHERYA
LIQHQRTHKNEKKFKCNQCDYACKQERCLMAHMYTHTGEKPFSCLDCNKHFRQKQLLMVH
LRKYHDPSFVPSVHLCLKCGKDFSRRSNLQRHRKKCDPEHEELSTSIKRGAVQKKQTVEE
GPGWDNDTAGQESSTSKEAQCPGELALGHHSGDRAARSESQDEGLTCEMILNMMDK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgaggtccctgtcccttctgagtccttcacccaaatcaaagagcagaag
ttgaagcctggagaccaggaaaaggaaaaggaggagggtggggtacaaagaatggaagcc
caggagtgtactgtcgaggtggaggccgagttctgccagcttctggatgcggggccccag
aaagaccagcctgagctgccttcatgggtcccggtggagagcgataggaggatcctgacc
ctgcagaccctgcacctgacctcccaggatgtgcacctgcaggggctggggtgcctgagt
gtgccacactccgaggggtttccagtgatgatgccacaggcagaaagcttcgtgccactg
ccctccgtgctgtggctggaacaagagccccagcccagccttcagcattgtgtggccatc
agcatcccggaagagctgtgcccacctgaggagctggagggcatgcatttccacctgctg
tgggaggctgtgccagtggctgaggaggaccgagaattaatgccagacttgggtgaaggc
gcagccctgatgaagtttgaagacgatgagaaggaccaactgttgtcagaggggggacca
gataaggaaggagaagagagataccttcttgtggaagtggcaccggaagatgaaggaaaa
gatgaaatcgttctgaccatttcccatctgaacctagaagaacagcaagatcagcccgcg
ccaaaccagacaagtgcacctaaggctgcggccacaaaacctccaaggaaggccaaggga
aagccacgcaccttccaatgcgacgtctgcctgttcacgtcttccaaattctcgactttc
acccgccacaagaaaattcacaacgacgagagacctcacctgtgccacctgtgcctgaag
gctttccgcactgtcaccctccttcggaaccacgtcaacacccacacagggaccaagccc
tacaagtgcggggactgtgacatggcatttgtcaccagcggagaactggtccggcacagg
cgttacaaacacacgtatgagaaacccttcaagtgctccatgtgcaagtatgccagcgtc
gaggcaagcaagctgaagcgccacatccgctcacacacaggtgagcgtcccttcaagtgc
taccaatgtacttacgccagcaaagacacctacaagctaaagcgtcatatgcggatccac
tcaggtgagaagccctatgaatgccccacttgccatgcccgcttcactcagagtgggacc
ttgaagatccacgtggtgcagaagcatggagaaaatgtgccgaaacatgtgtgtccccac
tgtgctaccgtcatcgcaaggaagagcgacctgcgtgtccatctgcgcaacctgcacagc
cacagccccgtggagatcaagtgccgatactgtcctgctggcttccatgagcgctacgcc
ctcatccagcaccagaggacccataagaacgagaagaaattcaaatgcaatcagtgcgat
tacgcatgcaagcaggagcgctgcttgatggcacacatgtacacacacacgggagagaag
ccgttctcctgcctcgactgcaacaagcacttccggcagaagcagctgctcatggtgcac
ctgaggaagtaccatgacccgagcttcgtccccagtgtgcacctttgcctcaagtgtggc
aaagacttctcccgccggagtaacctgcagagacacaggaagaagtgtgaccccgagcac
gaggagttgtctacttccataaaaagaggagcagtgcagaagaagcagaccgtggaggaa
ggaccaggatgggacaacgatactgctggccaggagagcagcacctcgaaggaggcacag
tgccctggggagctggctctcggccaccacagtggcgatcgtgcagccaggagtgagagc
caggatgaaggcctgacctgtgagatgatcttaaacatgatggataagtga
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integrated database retrieval system
