Arvicola amphibius (Eurasian water vole): 119814922
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Entry
119814922 CDS
T08327
Symbol
Trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119814922 (Trim36)
04121 Ubiquitin system [BR:
aamp04121
]
119814922 (Trim36)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119814922 (Trim36)
Membrane trafficking [BR:
aamp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
119814922 (Trim36)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119814922 (Trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
zf-RING_UBOX
ANCHR-like_BBOX
SPRY
zf-C3HC4_4
fn3
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
ATP-synt_B
Ig_DSCAM-DSCAML_C
Trm112p
Motif
Other DBs
NCBI-GeneID:
119814922
NCBI-ProteinID:
XP_038186947
LinkDB
All DBs
Position
5:complement(122356851..122399366)
Genome browser
AA seq
729 aa
AA seq
DB search
MSETGEMSEFGYIMELLAKGKVTIKNIERELICPACKELFTHPLILPCQHSVCHKCVKEL
LLSLDDSFNDVASDNSNQSSPRLRLTSPSMDKIDKISRPGWKRNSLTPRPTTFPCPGCEH
DVDLGERGVSGLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCN
ECFKIYHPWGTVKAQHEYVGPTTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGN
HSNHRVTTMSSAYKTLKEKLSKDIDFLIGKEGQVKSQISELNLLMKETECNGERAKEEAL
AHFEKLFEILEDRKSSVLKAIDASKKLRLDKFHTQMEEYQGLLENNGLVGYAQEVLKETD
QSCFVQTAKQLHLRIQKATESLKSFRPAAQASFEDYVVNTTKQTEVLGELSFFSSGIDIP
EINEEQSKVYNNALIDWHQPEKDKADSYVLEYRKINRDEEMMSWNEIEVHGTSKVVSNLE
SNSHYAFRVRAYRGSICSPCSRELVLHTPPAPVFSFLFDEKCGYNNEHLLLNLKRDRVES
RAGFNVLLAAERIQVGYYTSLDYIIGDVGITKGKHFWACRVEPYSYLVKVGVASSDKLQE
WLRSPRDTASPRYEQDSGHDSGSEDACFDSSQPFTLVTIGMKKFFIPKSPTSSNEPENRV
LPMPTSIGIFLDCDKGKVSFYDMEHMKCLYERQVDCSHTMYPAFALMGSGGIQLEEPITA
KYLEYEEDV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagacgggggagatgagtgaatttggctacattatggaattgctagccaaaggc
aaggtgactattaagaatatcgaaagagagcttatttgcccggcatgcaaggagctgttt
acacacccgctgattctcccctgccagcacagcgtctgtcataagtgtgtgaaggagctc
ttactgtcccttgatgattccttcaatgatgtggcctcagacaactccaaccagagcagc
ccgcggcttcggctcacctcccctagcatggataaaattgacaagattagcagaccaggc
tggaagcgtaattcactgaccccaagaccaactacgtttccttgtcctggctgtgagcat
gatgtggatcttggagagcggggagtcagcggcctgtttcgcaatttcactttggagacg
attgtcgagcgataccggcaggccgctagggcagccacggccattatgtgtgacctttgt
aaaccgccgccccaggaatccacaaagagctgcatggactgcagcgcaagctactgcaat
gaatgcttcaaaatttatcacccttggggtacagtaaaagcccagcatgagtacgtgggc
cccaccactaatttcagacccaagattttaatgtgcccagaacatgagaccgagaggata
aacatgtactgtgaactgtgcagaaggccagtctgccacctctgtaaactgggtgggaat
cattccaatcaccgggtgaccaccatgagcagtgcttacaaaaccttaaaggagaagctt
tcaaaggacattgatttccttattggtaaggaaggccaagtgaagagtcaaatttctgaa
ctaaacttgttaatgaaagaaacagagtgcaatggagagagggcgaaggaagaagcactg
gcccattttgaaaagctctttgaaatcctagaagacaggaagtcatctgttttgaaagcc
atagatgcctctaagaaactaagactagacaaatttcacacgcaaatggaagagtaccaa
ggccttctggagaacaacgggcttgtgggatatgctcaggaagtcctgaaggagacggat
cagtcctgctttgtgcagacagcgaagcagctccatctcagaatccagaaagctacggaa
tctctgaagagcttcagacccgcagcccaagcttcttttgaagactatgtcgttaacaca
accaaacagacagaggtgctcggagaactgtcctttttctctagtggcatagacattcct
gagatcaacgaggaacagagcaaagtatataataacgccttgatagactggcaccagcca
gagaaggacaaagccgacagctatgttcttgagtaccggaagattaatagagatgaggaa
atgatgtcgtggaatgagatagaagtgcacggcacaagtaaagttgtctccaaccttgaa
agtaacagtcattatgctttccgagtgagagcttatagaggttccatctgcagcccctgc
agcagagagctggttctgcacactcctccagctccagttttcagtttcctgtttgatgag
aagtgtggctataataacgagcacctcttgttaaacctgaagagagaccgggtggagagc
agagccggatttaacgttctcctggctgcggaacgcatccaagtgggctactacacaagt
ttagactacatcatcggagatgtgggaataacgaaagggaaacacttctgggcctgccgt
gtggaaccgtattcatacctggtcaaagtgggagttgcctctagcgacaaactgcaggag
tggcttcggtctccccgggacacggctagtcccaggtatgaacaagacagtggccacgac
agtgggagtgaagatgcctgctttgattcttcacaaccgtttacgttagttactataggc
atgaagaaattttttatacccaagtcacctacttcttccaatgaacccgaaaatagagtt
cttcccatgccaacaagtatagggattttcctagactgtgataaaggtaaagtgagcttc
tatgatatggagcacatgaaatgcctgtatgagcgccaggtagactgctcacatacaatg
tacccagcatttgccttaatgggcagtggaggaattcagcttgaagaacccatcacggca
aagtatctggaatatgaagaagacgtgtag
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