Arvicola amphibius (Eurasian water vole): 119814954
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Entry
119814954 CDS
T08327
Symbol
Pkd2l2
Name
(RefSeq) polycystic kidney disease 2-like 2 protein isoform X1
KO
K04991
polycystin 2L2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamp04040
]
119814954 (Pkd2l2)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119814954 (Pkd2l2)
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GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
MLD
DUF5333
Motif
Other DBs
NCBI-GeneID:
119814954
NCBI-ProteinID:
XP_038186988
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Position
5:111550479..111576860
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AA seq
622 aa
AA seq
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MADATWWYRGGTSKHDLHYRREAEVNTTLEELLLYFVFLINLCILTFGMVNPHMYYLNKV
MSSLFVDTSLPNDDRSSFRSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
YENILLGVPRVRQLRVRNNTCKVYSAFQSLVSDCYDKYTAENEDLSDFGLKSDREWKYSP
SPANAPWHWGFVGVYRDGGYIFTLSKSKSETQTKFADLRLHSWITRGTRVVFIDFSVYNA
NVNLFCIVRLVAEFPATGGLLTSWQFYSVKLLRYVTHYDYFIASCEIIFCIFLFVFITQE
LRKLNEFKSAYFKSVWNWLELLLLALCFLAVSFYAYCNLQSFVLLGRLLKNTENYPDFYF
LAYWQIYYNNMIAITIFFAWIKIFKFISFNETMSQLSSTLSRCMKDIVGFAVMFFIIFSA
YAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANWILGPIYFITFIFFVFF
VLLNMFLAIINDTYSEVKADYSIGRRPDFELGKIIKKSYLNVLEKLRLKKAQDSEDKKMK
TTGDLAQQARKEGFSESEIQGAEQMKTWKERLEKKYYSTDLQDDYQPVTQQEFRELFLYA
VELEKELHYISLKLNQVMRKLQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccacttggtggtaccgaggagggacttccaaacatgacttgcattacaga
cgggaagcagaagttaacaccacgcttgaggagttattactctactttgtgtttttaata
aacctgtgtatactgacttttgggatggtcaatccacatatgtactacttaaacaaagtg
atgtcgtctctgtttgtggacacgtccctccccaatgacgacagaagcagctttaggtcc
attcgcagcataactgacttttggaagttcatggaaggaccccttctggagggcttgtac
tgggactcgtggtacaacaaccagcagctgtacaatttgaagaacagcagccgtatctac
tacgagaacattcttctcggagtccccagggtacggcagctgagagtccgcaacaacacg
tgcaaggtctactcagcctttcagtcgctggtgagcgactgttacgataaatacacagct
gaaaacgaagacctgtctgattttggcctcaaaagtgatagagaatggaagtactcacct
tctcctgccaacgccccttggcactggggatttgtcggtgtgtaccgagacggagggtat
atattcacattatcaaaatccaaatctgaaacccaaaccaaatttgctgaccttcgactc
cacagctggatcacaagagggaccagggttgtttttattgacttttccgtatacaatgct
aacgtcaatctgttttgcatcgtcaggctggtggcagagttccctgcgacgggcgggctc
ctcacctcgtggcagttctattccgtgaagctcctcagatacgttacccactacgattac
ttcatcgcgtcctgtgaaatcatattctgtattttccttttcgtcttcataacacaagaa
ctgagaaagctgaacgagtttaagagcgcctatttcaaaagtgtttggaactggctggag
ctgctgcttttggcgctgtgtttcctggctgtctctttctatgcatactgtaacctgcag
agttttgtcctactcggacggctgctgaaaaacactgaaaactacccagacttctatttc
ctcgcgtactggcaaatctactataacaacatgattgctattactatcttctttgcatgg
ataaagatattcaaattcataagcttcaatgagaccatgtctcagctgtcgtcaaccttg
tcccgctgcatgaaggacatagtggggttcgccgtcatgttctttattatattctccgcg
tatgcccagctggggttccttgttttcgggtcacaggtcgatgacttttccacttttcaa
aattccatatttgcacaatttcggattgtccttggagactttaacttcgctggtatccag
caggccaactggatcttggggcccatttacttcatcacgttcatcttctttgtgttcttt
gtgctgctgaacatgttcttggcaataatcaacgacacatattctgaagtgaaggcagac
tactcaatcggcagaagacctgattttgagcttggtaaaataattaagaagagttacctt
aatgttctcgagaaactcagactgaagaaagctcaagatagtgaagacaagaaaatgaaa
accaccggagatctggcccagcaagccagaaaagaaggctttagtgaaagcgagatccaa
ggggcagagcagatgaaaacgtggaaggagaggcttgagaaaaagtattattctacagac
cttcaagatgactaccagcctgtcactcagcaagaatttcgagaactctttctatatgct
gtggagctggaaaaggaattacactacatcagtttaaaactaaaccaagtgatgcgaaag
ctacagtaa
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