Arvicola amphibius (Eurasian water vole): 119815117
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Entry
119815117 CDS
T08327
Symbol
Cd44
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04512
ECM-receptor interaction
aamp04640
Hematopoietic cell lineage
aamp05169
Epstein-Barr virus infection
aamp05205
Proteoglycans in cancer
aamp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119815117 (Cd44)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
119815117 (Cd44)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119815117 (Cd44)
05205 Proteoglycans in cancer
119815117 (Cd44)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
119815117 (Cd44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119815117 (Cd44)
04090 CD molecules [BR:
aamp04090
]
119815117 (Cd44)
00535 Proteoglycans [BR:
aamp00535
]
119815117 (Cd44)
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119815117 (Cd44)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119815117 (Cd44)
Exosomal proteins of other body fluids (saliva and urine)
119815117 (Cd44)
Exosomal proteins of colorectal cancer cells
119815117 (Cd44)
Exosomal proteins of bladder cancer cells
119815117 (Cd44)
CD molecules [BR:
aamp04090
]
Proteins
119815117 (Cd44)
Proteoglycans [BR:
aamp00535
]
Cell surface proteoglycans
Others
119815117 (Cd44)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Hyaluronan
Cell surface receptors
119815117 (Cd44)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
HpsJ
Motif
Other DBs
NCBI-GeneID:
119815117
NCBI-ProteinID:
XP_038187233
LinkDB
All DBs
Position
5:72539490..72624366
Genome browser
AA seq
699 aa
AA seq
DB search
MDKGWWHAAWGLCLLQLSLAQQQIDLNITCRYAGVFHVEKNGRYSISRTEAADLCQAFNS
TLPTMNQMLKALNAGFETCRYGFIENNVVIPRITPNAICAANNTGVYVLQSNTSHYDTYC
FNASAPLGEDCTSVTDLPNSFEGPVTITIVNRDGTRYSKTGEYRTHQEDIDASNTIDDDV
SSGSSSEKSTSGGYIFHTSLPTEYPTGDEDESYFTRSTPRTSTDSNTNPTGWEPKEENED
DTDKYPSFSGSGIDDDEDFISSTISPTPRVSDHPIQNQDWTQWKPSHSNPEVLLQTTTRM
TDVDRNSTIAHEENSTQDPQPPVNHHEYQEEEETPHATSTTWAAPSSTAEAAATQQDQWF
ENGWLGKPSPTATEDSHVTAGATASDGNNHPSQRMTTQRQEDVSWTEFLDPISHPMGQDH
QTERKDTDTSHSTTLQPAETPNTHVVEDLNRTRPLSVTTPQSHSQKVSTSHGELEEDQDH
PTTSILPSSTRSGGKDGRRGPSFPKDTTTSLEGYTPHYPDTMENGTLTPVAPAKTGVFEE
TEVTVAADFDFNVDGALPEGRDTSMDPRHGSDTVTYGSGSAGHSSGSQDGGANTTPLPGR
RPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGKVEDRKPSELNGEA
SKSQEMVHLVNKEPSETPDQFMTADETRNLQNVDMKIGV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggacaagggttggtggcacgcagcttggggactctgcctcttacagctgagcctggcg
cagcagcaaatcgatttgaatataacctgccgctatgcaggtgtattccatgtggagaaa
aatggccgctacagcatctctcggactgaggcagctgacctctgccaagctttcaacagc
accctgcccaccatgaatcagatgttgaaggctctgaatgcagggtttgaaacttgcagg
tatggatttatagaaaacaatgtggtgatcccgaggatcacccccaatgccatctgcgca
gccaacaacacaggagtgtatgtcctccaatccaatacttcccactatgacacatactgc
ttcaatgcctcagcgccccttggagaagactgtacatctgtcacggatcttcctaattcc
ttcgaaggaccagtgaccataactattgtcaaccgtgatggcacccgctacagcaagaca
ggagagtataggacacaccaagaagacatcgacgcctcaaatactattgatgatgatgtc
agcagtggatcttccagtgagaagagcacctcaggaggctacattttccacacttccctt
cccaccgaatacccaactggagatgaggatgaatcctacttcaccaggagcaccccgaga
accagtacggattcaaataccaacccaacaggctgggagccaaaggaggaaaatgaagat
gacacagacaaataccccagtttttctggatcaggcattgatgatgatgaagattttatc
tccagcaccatttctcccactcctcgggtttctgaccacccaatacagaaccaggactgg
acccagtggaagccaagccattccaatccagaagtactacttcagacaaccaccaggatg
actgatgtagacagaaacagcaccattgctcatgaagaaaactcaacccaggatccacag
cctcctgtcaatcaccatgagtatcaggaagaagaggagactccacatgccacgagcaca
acctgggcagctcctagtagtacagcagaagcagcagctacccagcaggaccagtggttt
gaaaatggatggctggggaagccctcccccacagcaacggaagactcccatgtgacagca
ggggcaactgcctcagacggcaacaaccatccaagtcaaagaatgacgacacagcgtcaa
gaggacgtctcctggactgagttcttggacccaatttcacatccaatgggacaagatcat
caaacagaaaggaaggatacagacaccagccatagtacaacccttcagcctgctgaaact
ccaaatactcatgtggtggaagatttgaacaggacaagaccactttcagtgacaactcca
cagagtcattctcagaaagtctctacatcacatggagaactggaagaagaccaagaccac
ccaacaacttctattttgccatctagcactaggagtggtggtaaagacggaagaagaggt
ccaagctttcccaaagacacaactacttctctggaaggctacacccctcattatccagac
acaatggaaaatgggactctcaccccagtggcccctgctaagactggggtctttgaagaa
accgaagtgactgttgctgcagacttcgactttaatgttgatggcgccttaccagaaggc
cgagacacatccatggaccccaggcatggttctgacactgtgacatatggatccggatca
gctggacactcaagtgggagtcaagacggtggcgcgaacacgactcctctacctgggagg
agacctcagattccagaatggctcatcatcttggcatctctcctggcactggctctgatt
ctggctgtttgcattgctgtcaacagtaggcgcaggtgtgggcagaagaaaaagctggtg
atcaacagtggcaatgggaaggtggaggacaggaagccgagtgagctcaacggagaggcc
agcaagtctcaggaaatggtgcatttggtgaacaaggaaccatcagaaactccagaccag
tttatgactgccgatgagacccggaatctgcagaatgtggacatgaagattggggtgtag
DBGET
integrated database retrieval system
