Arvicola amphibius (Eurasian water vole): 119815368
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Entry
119815368 CDS
T08327
Symbol
Sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119815368 (Sh3tc2)
Membrane trafficking [BR:
aamp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119815368 (Sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
TPR_12
SH3_2
SH3_9
TPR_1
SNAP
TPR_8
TPR_MalT
TPR_2
DUF5418
Motif
Other DBs
NCBI-GeneID:
119815368
NCBI-ProteinID:
XP_038187411
LinkDB
All DBs
Position
5:136434355..136486353
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AA seq
1274 aa
AA seq
DB search
MGGSQVSPDWRSQGPWPREDGAHMGGCFCIPGERSLPWGPDKEGPSKDSPGSSEDAASLE
NKGKCFLPQNMTQDLVLSFCVKSRSRSCVNAPLQEAARRRLWALENEDHEVCALFKDLSA
RLVSVQSQKDQFLITFKTVEEIWKFSTYLNLGYVSTCLEQLFFDHKYWLNCRLVDDTEIQ
VSVDDSHLENIYLGLLLQEGHFFCRATCSVAQPDEKEGEYLTLYKNELISVLPEGESEWE
SVSLVTGQRGLVPVSALEPLSVPFHQWFLKNYPGICDLPRKRDWTGSCHIGRGRCKALMD
YKKEEKDELSFLQGESIEILGFVIPGLQWFIGKSVTSGEVGFVPTRSIDPDSCSPVPVLH
LYLGEFESTQNLQNDLSVYQPEGLKEARSGGTWEERQTSDSRRSSSSLDSSLEEELLSAS
SDSYHLPEPDDLDDPELFMDLSTSLEEDEAEHFAPILAFLDHEGYSDHFKSLYDFSFSFL
TSSFYSFSEEDELVAYLETSRKWAKMTHMTWAHARLCFLLGRLSIRKIKLSQARVYFEEA
IRVLNGAFEDLSLVSALYINLAAIYLRQRLRHKGPALLEKAGALIACLPDREFSAKNELD
VVAYVLRQGIVVGSGPLEARSCFLAIRLLLNLGRHEEVLPFAERLQLLSGHPPASEATVT
MLSFLYDKKYLPHLAVASVQKRGPQSARGMSVSIWQAYFVLQNATKILGVPSSSWGEVSA
LACPSLRQALAACEEQTDLSTQRTLCLILSKMYLQYRSPDGSIYYLSQAQALGKLLGEQE
AFESSLCLAWAYLLARQTKKALEILEPLLCCLRETECMTQRGVVHNLLGLAFQEEGRTNR
AAKSYLRALIRAREMGNVRNQAVSMANLGHLTLKSCMQQSARGYLLQAVRLFSELQASKE
TDMELIQVLLWLGQALVSGQQLVHSRLCYEMALMFGLRHRHLNSQLQVTKSLCHFYSSVS
PNPDACITYHEHWLALAQQLRDREMEGRLLESLGQLYRNLNTSRSLRRSLTCIKESLRIF
VDLGERDKAAEAWLGAGRLHYLMQEDEVVELYLQAAIQTALRSEEPSLALKLYEEAGDVF
FNGTRHRHRAVEYYRAGAVPLARRMKAVRTELRIFNKLTELQISLEGYEKALEFATLAAR
LSVLTGDQKQELVAFHRLATVYFSLKMYEMAEDCYLRTLSLCPAWLQSPREALYYAKVYY
RLGCLTFYQLKDAHDATEYFLLALAAAVLLGDEELQDTIKNRLDNICQSPLWHSNPLGCS
SERARWLSGGSLAL
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgggaggctcccaagtttctcctgactggcgttcccaggggccttggcccagggaggat
ggtgcacacatgggtggctgcttctgtatccctggggagcggagtctgccctggggccca
gataaagaaggtccttccaaggattcacccggatcaagtgaggacgcagcctcacttgaa
aataagggaaaatgtttcctgccacagaacatgactcaagacctggtgctctccttctgt
gtgaagagccgctccaggagctgtgtcaatgcacccttacaggaggctgcacggaggcgg
ctctgggccctggagaatgaagaccatgaagtctgtgcactgtttaaggatctctctgca
aggctggtgagcgtccagtcccagaaggaccagttcctcatcaccttcaagaccgtggaa
gaaatctggaagttttccacctatctgaacttaggctatgtgtccacatgtctggaacag
ctcttctttgaccacaagtactggctcaactgcaggctggtggatgacacagagatccaa
gtgtctgtagatgacagtcacttggagaacatatacctgggcctcttgctgcaggaaggc
cacttcttctgcagagccacctgctccgtggctcagccagatgagaaggagggggaatat
ttgacgctgtacaagaatgagctaatctccgtgctccctgaaggcgaatctgagtgggaa
agcgtgtctttagtgacgggtcagaggggcctggtgcctgtgtcagccctggagcccctg
tctgtccctttccatcaatggttcctaaagaattacccaggaatctgtgatcttcccagg
aagagagactggacaggctcctgtcatattggcagaggacggtgcaaggccctgatggat
tacaaaaaagaggaaaaggatgaactgagcttcctccagggagaaagcattgagattctt
ggctttgttatccctgggctgcagtggttcattgggaagtcagtgacctcaggagaagtg
ggctttgtccccaccaggagcatagatccagattcctgctccccagtgcctgtccttcat
ctctacctaggtgagttcgaatccacccagaatctccagaatgatctgagcgtgtatcag
cctgagggcctcaaggaggccaggtctggtgggacctgggaggagcggcagacctcagac
tccagacgctccagcagttccctggactccagccttgaggaagagctcctctcagcctcc
tctgacagctatcaccttccagagcctgacgaccttgatgacccggaactgttcatggac
ctgagcacaagcttggaagaggatgaagcagagcactttgcccccatcttggcttttctg
gatcacgagggctacagcgaccactttaagagcctctatgatttctccttctctttcctt
acttcctccttttacagcttctctgaggaggatgagctagtggcctacctagagacctca
cgaaagtgggccaagatgacccacatgacatgggcccatgcccggctctgcttcctcctg
ggccgactaagcatcaggaagatcaaactttcccaggccagggtatactttgaggaggcc
atccgggtccttaacggggcatttgaggacctctccctagtgtctgctctgtacatcaat
ttggcagccatctatctgaggcagaggctaaggcataaaggcccagccttgcttgaaaag
gcaggtgccctgatagcctgcctgcctgaccgcgagttcagtgccaagaacgagcttgat
gtggtggcctatgtgctgcgccaagggattgtggtggggagtggccctctggaggccagg
tcctgcttcctggccatccgattgctcctgaaccttggccggcatgaagaagtcctgcca
tttgctgagcgcctgcagctgctttctggacaccctcctgcctcggaggctacagtcacc
atgttgagttttctgtatgacaagaaataccttccacatcttgcagtggcctctgttcag
aaacgtggtccccagagtgccagggggatgtctgtttccatttggcaggcctacttcgtt
ctccagaatgctactaagatccttggtgttccttcctcaagctggggtgaagtttctgcg
ctggcctgcccatccctcaggcaggccctggctgcctgtgaagagcagactgacctgagc
acccagaggaccttatgtctcatcctgtccaaaatgtacctccagtataggtctcctgat
ggatccatctactatctgagccaggcccaggcgttagggaagctactaggtgagcaagaa
gcctttgaatcgtctctctgtctagcctgggcttacctcttagccaggcagaccaagaaa
gctctggagatccttgaaccactactgtgttgcttgagggagacagaatgcatgacgcaa
aggggcgtggtccataacctcctaggacttgcatttcaagaagaaggccggacaaacagg
gcagccaagagctacctccgagctttgatcagggctcgggagatggggaatgtgcgtaac
caggccgtgtctatggccaatctcggccacttgaccctgaagtcgtgcatgcagcagtca
gccaggggttatcttctgcaagccgtccgactgttttctgaactccaggccagcaaggag
acagatatggaattgatacaagtgttactctggttgggccaagctctggtgtctggacag
cagctggtccacagccgcctttgttacgaaatggcattgatgtttggcttaaggcatcgg
cacttaaacagtcagcttcaggtcaccaaatccctctgccatttctacagctccgtgtcc
ccaaaccctgatgcgtgcattacatatcacgaacactggctggccctggctcagcaactc
agggaccgggagatggaggggcggttactggagtctctcgggcagctttatcggaaccta
aatacatccaggtccctcaggaggtccctcacctgcatcaaggagagtctgcggatattc
gttgacctaggggagagagacaaggcggctgaggcctggctgggggctgggcgtctgcac
tacctcatgcaggaggatgaagtggtggagttgtacttgcaggcagccatccagacagcc
ttgaggtccgaggagccctcccttgctctaaagctttacgaagaagcaggtgatgtgttt
ttcaatgggacccgccataggcatcgtgctgtggagtactaccgggctggggctgttcct
ttagcgaggagaatgaaggcggtgagaaccgagctacggatcttcaacaaactgaccgag
ctacagatcagcctcgagggctatgagaaagccttggaatttgccaccctggctgcccgg
ctgagtgtcctcacaggagatcagaagcaggagctggtggctttccaccgcctggctact
gtgtacttctctctgaagatgtatgagatggctgaagactgctacctgaggactctgtcc
ctctgcccagcgtggctgcagagtcccagggaggcgctgtactacgccaaggtgtattat
cgcctgggctgcctcactttctaccagctgaaggatgctcatgatgctactgaatacttc
ctgctggcgctagcagctgctgtcctgctgggtgacgaggagctgcaggacaccattaag
aacagactagacaacatctgccagagtcccttgtggcacagcaatcccttggggtgctcc
tcagagagggcgcggtggctcagtggcgggagcctggccctctga
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