Arvicola amphibius (Eurasian water vole): 119815402
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Entry
119815402 CDS
T08327
Symbol
Sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119815402 (Sema6a)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119815402
NCBI-ProteinID:
XP_038187441
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Position
5:complement(123410103..123535068)
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AA seq
1031 aa
AA seq
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MRPEALLLCLALLHSTGAAFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMVMNRTLYVAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNDDTLFVCGTNAFNPSCRNYKIDTLETFGDEFSGMARCPYDAKHANIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQALDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLERYATSNELPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRL
TKIAVDNAAGPYQNYTVVFLGSEKGIILKFLARIGSSGFLNGSVFLEEMNVYNPEKCSYD
GVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVKESG
SCAHLSPLSRLTFEQDIERGNTDGLGDCHNSFVALNGHSSSLLPSTTTSDSASREGYESR
GGMLDWNDLLEAPGSTDPLGAVSSHNHQDKKGVIRESYLKSNDQLVPVTLLAIAVILAFV
MGAVFSGITVYCVCDHRRKDVAVVQRKEKELTHSRRGSMSSVTKLSGLFGDTQSKDPKPE
AILTPLMHNGKLATPSNTAKMLIKADQHHLDLTALPTPESTPTLQQKRKPNRGSREWERN
QNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQGYQHEYVDQPKMSEVVA
QMALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVPQREASLGPPGASLSQTG
LSKRLEMHHSSSYGLEYKRSYPTNSLTRSHQSTTLKRNNTNSSNSSHLSRNQSFGRGDNP
PPAPQRVDSIQVHSPQPPGQAVSVSRQPSLNAYNSLTRSGLKRTPSLKPDVPPKPSFTPL
STSMKPNDACT
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaggccagaagccttgctgctatgtctcgcactgctacacagcactggggctgctttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcacaggctggacatccagatg
atcatggtcatgaacagaactctctacgttgctgctcgggaccatatttatactgttgat
atagacacatcccacacagaagaaatttattgtagcaaaaaactgacatggaaatctaga
caggctgatgtagacacgtgcaggatgaaggggaaacataaggatgaatgtcacaatttc
attaaagttctcctcaagaagaacgacgataccctgtttgtctgtggaaccaatgccttc
aacccttcctgcagaaactacaagatcgatactttggaaacttttggggatgaatttagt
ggaatggccagatgcccttatgatgccaaacatgccaacatcgccctgttcgcagatgga
aaactctactctgccacagtaactgacttcctggccattgatgcagtcatttacaggagc
cttggagacagccctaccctcaggaccgtcaaacatgattccaagtggttgaaagagccg
tactttgtccaagcactggattatggagactatatctacttcttcttcagagaaattgcg
gtagagtacaacactatggggaaggttgtcttccctagggtggctcaggtttgcaagaat
gacatgggagggtctcagagagtcctggagaagcagtggacgtctttcctgaaggctcgc
ctgaactgctcagtgcccggagactctcatttttatttcaatatactccaggcagttaca
gatgtgattcgcattaatggccgtgacgttgtcttggcaaccttttccacaccttataac
agcatccccgggtctgcagtctgtgcctatgacatgcttgacattgccaatgtttttact
gggaggttcaaggaacagaagtctcctgattctacttggacgccagttccagatgagcgt
gtccctaaacccaggccaggttgttgtgctggctcgtcgtctttagaaagatatgcaacc
tccaatgagcttcctgacgacaccctgaacttcattaagacacacccactcatggatgag
gcagtaccgtccatcatcaaccgaccatggttcctgagaacgatggtcagataccgcctg
accaaaattgcagtagacaatgccgctgggccatatcagaattacactgtggttttcctg
ggatcagaaaagggaatcatcttgaagttcttggccaggataggaagcagtggtttctta
aatggcagcgttttcctggaggagatgaatgtttacaacccggaaaagtgcagctatgat
ggcgtggaggacaaaaggattatgggcatgcagcttgacagagcaagcggctcactgtat
gtggcattctctacctgcgtgataaaggtgcctcttggccgctgcgaacggcatggcaag
tgtaaaaaaacctgtatcgcctccagagacccatattgtgggtgggtgaaggaaagcggt
tcctgtgcccatctgtcacccctcagcaggctgactttcgaacaggacatagagcgtggc
aatacagatggcctaggagactgtcacaattccttcgtggccctgaatggacactccagt
tccctcctgcccagcaccaccacgtcagattcggcatcccgagaggggtatgagtctagg
ggaggcatgctggactggaacgacctgctcgaggcacccggcagcacagaccctttgggg
gctgtgtcctcacataaccaccaggacaagaagggagtgattcgggaaagttacctcaaa
agcaacgatcagctcgttcctgtcaccctcttggccattgcagtcattctggcttttgtc
atgggggccgtcttctcaggcatcaccgtgtattgtgtgtgcgatcaccggcgcaaagat
gtggcggtagtgcagcgcaaagagaaagagctcacccactcgcgtcggggatctatgagc
agtgtcaccaagctcagtggtctctttggggacacccagtccaaagacccaaagcccgag
gccatcctcacgccactcatgcacaacggcaagctggccacgcctagcaacacggccaag
atgctgatcaaagctgatcagcaccacctagacctcaccgccctgcccacgccagaatcc
accccgacgctgcagcagaagcggaagcccaaccgcggcagccgcgagtgggagaggaac
cagaacctcatcaatgcctgcaccaaggacatgccccctatgggctcccctgtgattccc
acggacctcccccttcgggcctccccaagccacatccccagcgtggtggtcctgcccatc
acgcagcagggctaccagcatgagtatgtggatcagcccaaaatgagtgaggtggtggct
cagatggctctggaggaccaggccgccaccctggagtataagaccatcaaagagcatctg
agcagcaagagtcccaaccacggggtgaaccttgtggagaacctggacagcctgcccccc
aaagttccacagcgcgaggcctccctaggccccccgggagcctcactgtcgcagaccggc
ctcagcaagcggttggaaatgcaccactcctcctcctacgggcttgagtataagaggagc
taccccacgaactcactcacgagaagccaccagtccaccactctcaaaagaaacaatact
aactcctccaattcctcccacctctccaggaaccagagctttggccggggagacaacccg
cctcccgccccgcagcgggtagactccattcaggtgcacagcccccagccccctggccag
gccgtgagtgtttcgaggcagcccagcctcaatgcctacaactcactgacgaggtcaggg
ctgaagcgcaccccctcgctaaagccagacgtaccccccaaaccctcctttactcccctt
tccacatccatgaagcccaatgatgcgtgtacataa
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