Arvicola amphibius (Eurasian water vole): 119815419
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Entry
119815419 CDS
T08327
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119815419 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119815419 (Polr1b)
Enzymes [BR:
aamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119815419 (Polr1b)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119815419 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF7757
Motif
Other DBs
NCBI-GeneID:
119815419
NCBI-ProteinID:
XP_038187473
LinkDB
All DBs
Position
5:complement(46597865..46623730)
Genome browser
AA seq
1135 aa
AA seq
DB search
MEPDGRWRSLPSGPSLKHLTDPSYAIPPEQQKAALQDLTRAHVDSFNYAVLEGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPSVPKGTICKELSVYPAECRGRRSTYRGKLTADISW
AVNGVPRGVVKQFLGYVPIMVKSKLCNLYNLPPQVLIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIALIRPKWKSRGLGYTHFGVSMHCVREEHSAINMNLHYVENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEEDSFFKNSVSQMLRIVMDEGCSTQKQV
LNYLGERFRVKLSLPDWYPNEEAAKFLFNQCICIHLKSDTEKFYLLCLMTRKLFALARGE
CMEDNLDSLVNQEVLTPGQLFLMFLKEKMENWLASIKIALDKRAQKTNVSINNENLLKVF
SMGSELTKPFEYLLATGNLRSKTGLGFLQYSGLCVVADKLNFIRYLSHFRCVHRGAEFAK
MRTTTVRRLLPESWGFLCPVHTPDGAPCGLLNHLTATCEVVTKFVYTASVPALLCGLGVT
PVDAASCRPYSDCYPVLLDGVMVGWVDKDLAPEVADALRRFKVLREKRIPPWMEVALVPM
TGKASLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNVAIFEDEVFAGISTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPCMYDYYHMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKFKQGDDNLVFGVKPGDPRVMQKLDNDGLPFIGAKLQFGDPYYSYLNLNTGEGFVVY
YKSKENCIVDNIKVCSNDTGSGKFKCICITIRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEESSALG
YFGEMLKAAGYNFYGTERLYSGISGMELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSTAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCGRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgacggccggtggcggagcctgcccagcgggcccagcctgaagcacttgacc
gacccctcgtacgcgattcctccggagcagcaaaaggctgcgttgcaggacctgacgcgg
gcgcacgtggactccttcaactacgcggtgctggaggggctgagccacgcggtgcaggcc
attcctccctttgaatttgctttcaaagatgagcgcatatctcttactatcgtggatgct
gtcatcagtccgccttcagtgcccaaagggaccatctgcaaggagctcagcgtttaccca
gccgagtgccggggacgaaggagcacctaccgtgggaagctgacggctgacatcagctgg
gcagtgaacggagtccccagaggagtcgttaaacagtttcttggctatgtccccatcatg
gtaaagtctaaactttgcaacttatacaaccttcctcctcaagtcctcattgagcaccat
gaagaggcagaggaaatgggaggttattttataatcaatggcatcgaaaaagtcatccga
atgttgattatgcctcggaggaatttccccattgccttgataagaccaaagtggaaaagc
agagggcttggctacactcattttggggtctccatgcactgtgtgagagaagagcattcc
gccatcaacatgaaccttcactatgtggagaatggcacagttatgttgaactttatttac
cggaaagagctgtttttccttcctttgggatttgcacttaaggcacttgtgagcttttcc
gactaccagattttccaggagctcatcaaaggaaaagaggaggactctttctttaagaat
tctgtctcgcagatgttgaggatcgtcatggacgagggctgctccacgcagaagcaggtc
cttaactatctgggcgagcgcttcagagtgaagctcagtctccctgactggtacccgaat
gaggaagctgccaagttcctgttcaaccagtgcatttgtatccacctgaagtcggatact
gagaagttttacctgctctgtctcatgacccggaagctctttgctctagccagaggcgag
tgcatggaggacaacctcgacagcttagtgaatcaggaagtcctcacccctggtcagctc
ttcctgatgtttctgaaggaaaaaatggaaaattggctagcatctattaaaatagcttta
gataagagggctcagaagaccaatgtatccataaacaatgaaaatttgttgaaggtattt
agtatgggatcagaactaacgaaaccatttgaatatcttcttgctactgggaatctgcga
tcaaaaacaggtctcggcttcctgcaatactctggcctgtgtgttgtggctgacaagctg
aacttcattcgctatctgtcccatttccgctgtgtgcacagaggggctgaatttgccaag
atgaggaccaccacagtgcgcaggctgctccccgagtcctggggcttcctctgtcctgtg
cacaccccagacggagcaccgtgtgggctgctgaaccacctgactgccacatgcgaggtt
gtcacgaagttcgtgtacaccgcatctgtcccagccttgctctgtggcctaggtgtcact
cctgttgatgcggcatcttgtcgaccatacagtgactgctacccagtcctgctggatggt
gtcatggtgggctgggtggataaggatcttgctcctgaggtcgcagacgctctccgtcgc
tttaaggtgttgagggagaaaagaattcctccctggatggaggtggccctggtccccatg
acaggaaaggcaagcctgtacccggggttgtacctcttcaccaccccctgcaggctggtg
aggcctgtgcagaacttggaactgggcaaagaagaactcattggaacgatggaacagctc
ttcatgaacgttgccatttttgaggatgaggtttttgctgggatttccacacaccaggag
ctcttccctcacagcctgctgagtgtgatcgccaacttcatccccttctctgatcacaac
cagagtcctcggaacatgtaccagtgccagatgggtaagcagaccatgggcttcccactg
ctcacttatcaagaccgatcagataataaactctaccgtcttcagacacctcaaagcccg
ctagtgagaccatgcatgtatgactattaccacatggacaactatccgatcgggacaaat
gccatcgtagctgtgatctcctacactggctatgacatggaagatgccatgatcgtgaac
aaggcttcttgggaacgaggctttgctcatggaagtgtctacaagtctgaattcatagac
ctctctgaaaaatttaagcaaggggatgataatcttgtgtttggggtcaaacctggtgac
ccccgggttatgcagaagttggacaatgatgggttgcctttcataggagcaaagctgcaa
tttggtgacccctactacagctacctcaaccttaacaccggggaaggcttcgtggtttac
tataagagtaaagagaattgtattgtggacaacatcaaagtgtgtagcaatgacacgggc
agcgggaaattcaaatgcatctgcatcaccatacgagtccctcggaatccaactattgga
gataaatttgccagccgtcacggacagaagggcattttgagcagattgtggccagctgag
gacatgccttttactgagagtgggatggtgcccgacattctgtttaatcctcatgggttt
ccctctcgtatgaccattggaatgttaatcgaaagtatggctgggaagtctgcggctttg
cacggtctctgccatgatgctacccccttcatcttctccgaggagagctcagccttgggg
tactttggggagatgctaaaggctgctggctacaacttctatggcactgagcgattatat
agtggcatcagcgggatggagctggaagcagacattttcatcggtgtggtttattaccag
cgcttacgccacatggtgtcagacaaatttcaagttagaaccacgggagcccgggacaaa
gtcaccaaccagcctatcgggggaaggaacgtccagggtggaatccgctttggggagatg
gagcgggatgctctgttggcacacggtacatcctttctccttcatgatcggcttttcaac
tgctctgaccgctcgactgcccacgtgtgtgtgaaatgtggcagcttgctctccccacta
cttgaaaagcctcctccttcctggtctgctatgcgcaacagaaaatacaactgcactgtc
tgtggccgcagtgacaccatcgacactgtctctgtgccgtatgtcttccggtattttgta
gctgagctggcagctatgaacatcaaagtaaaactggatgtcgtttaa
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integrated database retrieval system
