Arvicola amphibius (Eurasian water vole): 119815434
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Entry
119815434 CDS
T08327
Symbol
Nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119815434 (Nup160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119815434 (Nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119815434 (Nup160)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119815434 (Nup160)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119815434 (Nup160)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119815434 (Nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
TPR_2
Motif
Other DBs
NCBI-GeneID:
119815434
NCBI-ProteinID:
XP_038187495
LinkDB
All DBs
Position
5:complement(84633498..84694335)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAAAGSLERSFVELIGTERERPRHFREFTARGVGTANAVFGAVKYSESAGGFYYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCSLLPSGVHVSETQNHVIIL
ILTNQTVHRLILPHPSRMYRSELVTESQMQSIFTDIGKVDFRDPCNYQLIPTVPGLSPNS
TTSAAWLSSEGEALFALPSAAGGIFVLKLPPYDIPGAASVVELKQSSVMQRLLTGWMPTA
IRGDQGPSDRALSLAVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGIYMHAPKRGQFCVFQLVSTENNRYSLDHISSLFTSQE
TLVDFALTSTDIWALWHDAENQTIVKYINFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPR
EMYLRSLFTPGRFINAALSKALQIFCRGTERNLDLSWSELKKEITLAVENELQGSVTEYE
FSQDEFRTLQQEFWCKFYACCLQYQEALSHPLALHLNPLTNMVCLLKKGYLSFLAPSSLV
DHLYLLPDEHLLTEDETTISDDADVARDVICLIKCLRMIGESVTMEMAVLMETSCYNLQS
PEKAAEHILEDLITIDVENVMEDICSKLQEIRNPVHAIGLLIREMDYETEVEMEKGFDPA
QPLNVRMNLYQLCGSSTAGSVVCRGVYKIASTRFLICRDLLILQQLLTRLGDAVILGAGQ
LFQAQQDLLPRTAPLLLSYYLIKWASQCLATDVPVDTLESNLQHLSVLKLTDSGALMANK
LVSCPQTIMELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLNPWCQVNVGSCRFMLGRCYLVTGEVQKALECFCQAA
SEVGKEEFLDRLIHSEDGEIVSTPKLQYYTKVLSLLGVVGLPELIIQLAAAAITETGDDW
KSQAILRTCIFKHHLDLGHNSQAYEALTQIPDSSSQLDCLRQLVVVLCERSQLQDLVAFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVSDRPGASPKRNHDGECTVAPSNRQ
IEILELEDLEKECSLARIRLALARHDPSAIAIAGSSSAKEMVTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSAADEAWRLLST
YLGRHRVQNNLYHHGVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIVLSQKILD
KLEDYQQKVDKATRDLLYRRDL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggatccctggaacggagcttcgtggagctgatcggaactgaacgcgaa
aggccccggcactttcgggaatttacagcccgcggtgttgggactgcaaacgctgtgttt
ggagccgtgaaatatagtgagagcgcgggaggcttctattatgtggaaagtggcaagttg
ttctccgtcaccagaaacaggttcattcattggaagacttctggggatacattggagctg
gtggaggaatcactggacataaatttgttgaataatgcagttcgcctaaaattccaaaat
tgcagcctcttacccagtggggttcatgtctctgaaactcagaatcatgtgataatcttg
atattaaccaatcagacagtgcacaggttaattttaccacacccttcccgtatgtacaga
agtgagctggtaactgaaagtcagatgcagtcaatatttactgacattggaaaagttgat
ttcagagatccttgcaactatcagttaattccaacagtacctggcctgtccccaaattct
accacctctgcagcctggctcagcagcgagggagaggctctgtttgctctaccatctgct
gctggcggcatctttgttcttaaactgcctccgtatgacatacctggggcagcgtcagtt
gtggaactgaaacagagttccgtgatgcagcgattgctcacgggctggatgcccacggct
ataaggggtgatcaggggccttcggatcgagccctcagtcttgctgttcattgtgttgaa
cacgatgctttcatttttgccctgtgtcaggatcataaactgcggatgtggtcctataag
gaccaaatgtgcctgatggtggctgacatgctggagtacgtccctgtgaacaaagacctt
cgactcactgcaggaacgggacataaattacgacttgcatattcaccatccatgggactc
tacctaggaatatatatgcatgccccaaaacgaggacagttctgcgttttccagttggtg
agcactgagaataatcgctatagtttagatcacatttcttcactgttcacttctcaggag
acactggtcgattttgccttaacctcaacggatatctgggccctgtggcatgatgctgag
aaccaaacaattgtcaaatatatcaactttgaacacaatgttgcaggtcagtggaatcca
gtttttatgcagcctctgccagaagaagaaattgtcatcagagatgaccaggaccccagg
gaaatgtatttgcggagcctttttacaccaggacgattcataaacgcggctttatctaaa
gctttacagattttctgccggggaactgagagaaacttggatctttcgtggagtgaactt
aaaaaagaaattactttagctgttgaaaatgagctccaaggaagtgtaacagaatatgaa
ttctcccaggatgagttccgtactttgcaacaggaattctggtgcaagttctatgcctgc
tgtctccagtatcaggaagccctctctcaccctcttgctctacatttgaatcctctcaca
aacatggtgtgccttctgaagaaaggatacctgtctttcctggcgccatcttccttagta
gatcatttatatctcctgcctgatgagcaccttttgacagaggatgagacaaccatatcg
gatgatgcagatgtggctcgggatgtcatatgtcttataaaatgcctccggatgattgga
gagtcagttaccatggagatggcagttctgatggaaaccagttgttataacttacagtct
ccagaaaaagctgcagagcacattttggaagatttgatcactattgatgtagaaaatgtg
atggaagacatttgtagtaagctgcaagagatcagaaaccctgtccatgccattggactt
cttatacgggaaatggattatgagacagaagtagagatggaaaagggatttgatccagct
cagcctttgaatgttcgaatgaatctctaccaactctgtggcagtagcacagcgggctct
gttgtgtgcagaggtgtgtataaaattgccagcactcgcttcctgatctgccgagaccta
ttgatcttacagcagcttttaacaagactgggagatgcagtgatcttgggagctggtcaa
ctctttcaggctcagcaagacttgctgccccgcacagctcccctgctcttgtcctactac
ctcattaagtgggcaagccagtgcttggcaacggatgtcccagtcgacacactggaatct
aatctgcaacatttgtcagtactgaaattaactgattctggtgccttaatggcaaataaa
ttggtgtcttgtcctcagacaattatggagttattcttccaagaagttgcaagaaaacat
attatatctcatctcttctctcaaccaaaagctcctttgagtcaaactggattgaactgg
cctgaaatgattactgcaattaccagttatttgttgcagcttttatggcctagcaatcct
ggttgtctctttctagaatgtctgatgggaaattgccagtatgtacaattgcaggattat
attcaactgttgaatccctggtgtcaagtcaatgttggatcctgtcgatttatgctggga
cggtgttacctggttacgggagaagtgcagaaggctctggaatgtttctgtcaggcagca
tctgaagtaggcaaagaagaattcctagatcgcttgatccactcagaggatggggagatt
gtgtcaactcccaagcttcagtattatactaaggttttaagtctactgggtgttgttgga
ttgcctgaactgattattcagctggctgcggcagcaattactgaaaccggtgatgactgg
aaaagtcaggctattttaagaacatgcattttcaaacatcatttggacttgggtcacaat
agccaagcatatgaggccttaacccaaattcctgattccagcagtcagctggactgcttg
cgacagctggtggtggttctttgcgagcgctcccaattgcaggacctcgtagcgtttccc
tatgtgaatctgcataatgaggttgtaggaataattgaatcacgtgctagagctgtggac
cttatgactcacaattactatgaacttctctatgcttttcacatctaccgccacaattac
cgaaaagctggtacagtgatgtttgaatatggtatgcgccttggcagagaagttcgaact
ctccggggactcgagaagcaaggcaactgctacctggctgctattaactgtttacgcctt
atccgtccagaatacgcgtggatcgtccagccagcttctggggcagtgtctgatcgccct
ggcgcatctcccaagaggaatcatgatggcgagtgcacagttgccccaagcaatcgacaa
attgaaattctggaactggaagatctggaaaaagaatgttctttagctcgaattcgcctt
gcgttggctcggcatgacccatcagcgattgccattgcaggaagttcatcagcgaaggag
atggtcactcttctggttcaggctggcctttttgacactgccatatcactgtgtcagact
tttaagcttcccttaaccccagtctttgaggggcttgcttttaagtgcatcaaattgcag
tttggaggagaagcagcacaagcagaagcctgggcctggctagcagccaatcagctgtct
tctgtcatcactacgaaggagtccagtgctgcagatgaagcgtggcggctgctgtcgact
tacctgggaagacacagagtccagaataacttgtaccatcatggtgtgattaacaagttg
ttgtctcatggagtccctctgcctaactggcttataaacagttacaagaaagttgatgct
gctgagttgcttcgtctgtacctgaactatgaccttttagaagaagctgtcgatttggtc
tccgaatatgtggatgctgtattagggaaaggacatcagtactttggaattgagttccca
ctgtctgcaacagccccaatggtctggctcccatactcctctattgatcagcttctccag
gctcttggagaaaacagtgccaacagtcacaacattgtactgtcccagaaaattcttgac
aaactagaagactaccagcaaaaagttgacaaggcaacacgggatttattataccgtcgg
gacttgtga
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integrated database retrieval system
