Arvicola amphibius (Eurasian water vole): 119815443
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Entry
119815443 CDS
T08327
Symbol
Rae1
Name
(RefSeq) mRNA export factor
KO
K14298
mRNA export factor
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp05014
Amyotrophic lateral sclerosis
aamp05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119815443 (Rae1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
119815443 (Rae1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119815443 (Rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119815443 (Rae1)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119815443 (Rae1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119815443 (Rae1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119815443 (Rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
119815443
NCBI-ProteinID:
XP_038187501
LinkDB
All DBs
Position
5:complement(5819566..5833781)
Genome browser
AA seq
368 aa
AA seq
DB search
MSLFGSASGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtttggatcagcctctggatttgggactggtgggaccagcatgtttgggagc
acaaccacagataatcacaacccaatgaaggacattgaagtaacatcttctcctgatgac
agcatcggttgtctgtccttcagcccaccgaccttaccagggaatttccttattgcagga
tcgtgggctaatgacgttcgctgctgggaagtgcaagacagtgggcagaccattccgaaa
gcccagcagatgcacaccgggccagtgcttgacgtctgctggagtgatgatgggagcaaa
gtattcacagcatcgtgtgataaaacagccaagatgtgggacctgaacagcaaccaggcc
attcagatagcacagcacgatgctcctgttaagaccatacattggatcaaagccccgaac
tacagttgtgtgatgacaggaagctgggataagaccctgaagttttgggatacccggtcg
tcaaatcctatgatggtcttgcaactccctgaacgctgttactgtgcagacgtgatatac
ccgatggctgtggtggccactgcagagagaggcctaattgtctaccagttagagaatcag
ccttctgagttcaggaggatagagtctccactgaaacaccagcatcgatgtgtggctatt
tttaaagacaaacagaacaagccgacaggttttgctctgggaagtattgagggcagagtt
gccattcactacatcaaccctccgaatccggccaaagataacttcaccttcaaatgccat
cgatccaacggcaccaacacttcagctcctcaagacatctatgcagtgaatggaattgcc
ttccatcctgttcatggcacccttgctactgtggggtctgatggtaggttcagcttctgg
gacaaagatgccaggaccaaactaaagacttcggaacagttagatcagcccatagcggct
tgctgcttcaatcacaatggaaatatatttgcctatgcttccagctatgactggtccaag
ggacatgagttttataatcctcaaaagaaaaattacattttcctgcgtaatgcggctgaa
gaactaaagccacggaacaagaagtag
DBGET
integrated database retrieval system
