Arvicola amphibius (Eurasian water vole): 119815560
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Entry
119815560 CDS
T08327
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-14-like
KO
K16494
protocadherin beta
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119815560
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Protocadherins
119815560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
119815560
NCBI-ProteinID:
XP_038187662
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Position
5:114487477..114489959
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AA seq
792 aa
AA seq
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MMILQKRQVLVFFVLLGLSRASTESLHYSVAEETEIGSFVANLAKDLGLGVAELSSREAR
VVSDDNKKRLHLNLLTGDMLVSERLDREELCGSSQPCVLPFQVVLENPLQFHRAELHVRD
INDHSPTFLDKEISIKIPESALIGATFLIENAQDLDVGSKGLQDYTISPNSHFYVKIHDS
SDGKMYPELVLDRALDHEEESELRLTLTALDGGSPPRSGTTSVLIKVMDINDNAPEFAQS
FYEVQVPEDTPVGSSIIAISATDLDMGNYGKISYSFLHASEGIRKTFKINPTSGEVNLRS
LLDFEVIQSYSVNIQATDGGGLSAKCTLSVKVLDINDNAPEVTISSITKTVPENASETLV
ALFSVRDQDSGDNGRILCSIEDDLPFILKPTFKNFFTLLSEKALDRESRSEYNITITVSD
MGTPRLSTQHTITVEVSDINDNAPTFTQSSYTLFVHENNSPALHIGTISATDSDSGSNAH
ITYSLLPTHDPQLPLSSLISINADNGQLFALRALDYETLQSFEFRVSAKDQGSPALSSQA
LVRVLVLDANDNAPFVLYPLQNAXFTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLL
KATEPGLFSVWAHNGEVRTSRLLSERDASKHRLLLLVKDNGDPPRSASVTLHVLVVDGFS
QPFLPLPELARDSTQDEDALTLYLVIALASVSSLFLLSVLLFVGVRLCRRARASTLGDYS
VPEGHFPGHLVDISGTGTLSQSYQYEVCLTRGTGTNEFKFLKPALPSLQLHDAGSNMQEK
ENFRNSLGFNIQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatgattctgcagaaaaggcaagtcttggttttctttgttttgctgggattgtctagg
gcaagtactgaatctttgcactattctgtagcagaggaaacagaaattggctcttttgtg
gctaacctggccaaggatctggggctgggagtagcggagctgtcctccagggaggccaga
gtagtgtcagatgataataaaaagcgtttacaccttaatttgctgacgggagatatgctc
gtgagtgagagactggaccgggaagagctgtgtggctcctcccagccctgtgtgctgcct
tttcaggtggttctggaaaaccctttacagtttcatcgagctgagctgcatgtcagagat
ataaatgatcactcccccacattcctggacaaggaaatatctattaaaataccggaaagt
gcattgatcggagccacatttttaattgagaatgcacaagatctggacgtaggaagcaaa
ggtctccaggactacaccattagtcccaattctcatttctatgttaaaattcacgacagc
agtgatggaaagatgtatccggagctggttctagacagagctttagatcatgaggaggaa
tctgagcttagactgacacttacagccttggatggtgggtctccacccaggtctgggaca
acatcggttctcataaaggttatggacatcaatgacaacgctcccgagtttgctcagagt
ttctatgaggtgcaggtcccagaggacacgcccgttggttccagtattattgctatctct
gctacagatttagatatgggaaattatgggaaaatatcatattcatttttgcatgcatca
gaaggcattagaaaaacctttaaaatcaacccaacatctggggaagtcaacttgagatca
ttactggattttgaagtaatacaatcctactctgtaaatatccaagcaacagatggtgga
ggtctttcagcaaaatgcactctttcagttaaagtattggatataaacgacaatgcacca
gaagtgaccatatcatcgattacaaagacagttccagagaatgcttcagagaccctggtc
gctcttttcagtgtccgagatcaagattctggggacaatggaaggatcctttgctctatt
gaggacgaccttccatttatcctgaaacccaccttcaagaactttttcactctactctct
gaaaaagcactggacagagagagcagatctgagtacaacatcacgatcacagtcagcgac
atgggcacacccaggctctcaacccagcacaccataacagtggaggtctctgacatcaac
gacaatgcccccaccttcactcaaagctcctacaccctgtttgtccacgagaacaacagc
cccgccctgcacataggcaccatcagcgccacagactcagactcaggctccaatgcccac
atcacctactcgctgctgcccacccacgacccacagctgcccctctcctcgctcatctcc
atcaatgccgacaatgggcagctgttcgcgctcagggcgctggactacgagaccctgcag
agcttcgagttccgagtgagcgccaaagaccaaggctcgcctgcactcagtagccaggcg
ctggtgcgcgtgctggtgctggacgccaacgacaatgcgcccttcgtgctctacccgctg
cagaacgccnncttcacagagctgctgcccagggcggcagagcctggctacctggtcacc
aaggtggtggctgtggaccgcgactctggccagaacgcctggctgtcgttccagttgctc
aaggccacggagcctggactgttcagcgtgtgggctcacaatggcgaggtgcgaacctcc
aggctgctgagcgagcgcgatgcttccaagcacaggctgctgctgctggtcaaggacaat
ggcgatcctccgcggtctgccagtgtcactctgcatgtgctggtggtggatggcttctct
cagcccttcctgcctctgcctgagttggcgcgcgactccacccaggacgaggatgcgctc
acgctgtacctggtcattgccttggcgtctgtgtcttcgctcttcctcttgtctgtgctg
ttgttcgtgggggtgaggctgtgcaggagggccagggcgtccactctaggtgactactct
gtgcctgagggacactttcctggccacctggtggacatcagcggcacgggaaccctgtcc
cagagctaccagtatgaggtgtgtctgacgagaggtactgggactaatgagttcaaattc
ctgaagccagctctccccagtcttcaactccacgatgctggttctaatatgcaggaaaag
gagaactttcggaatagtcttggatttaacatccaataa
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