Arvicola amphibius (Eurasian water vole): 119815574
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Entry
119815574 CDS
T08327
Symbol
Cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119815574 (Cpne1)
Spliceosome [BR:
aamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119815574 (Cpne1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
119815574
NCBI-ProteinID:
XP_038187674
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All DBs
Position
5:22215877..22256446
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AA seq
997 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLP
ATAPNFNNPSPSVVTATTSVHESSKNIQTFSTASIGTAPPSMGTSFGSPTFSSTIPSTAS
PMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPINPLPP
MSGMPPLNPPPVAPLPTGMNGSGAPMSLNNNLNPVFLGPLNPVNPIQMNSQSSVKSLPIN
PDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGSSGQAHPPPQTLPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
DADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREIVLNPEGDVN
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDARK
SEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKIPVPGNPAVPVMPSTGMPAA
GIPTAGIPGAGIPGAGMPGAGMPGAGMPNAGMPTAGMPGAGMPSAGIPGAGIPGAGIPGP
AMPGPAMPGPAIPGPAMPGPAMPGPAIPGPAIPGAAIPGPAMPGAGIPTAGGEEHVFLTV
GSKEANNGPPFNFPGNFGGPNAFGPPLPPPGLGGAFGDVRPVMPSVGNSGLPGLGLEVPG
FGGAPNNLSGPSGFGGIPQNFGNGPGSLSAPPGFGSGPPGLGNVPGHLSGPPAFGPGPGP
GPIHIGGPPGFAASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGM
PTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccatccctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactgttattgagtagtaaaacagaaatgcag
aatatgattgaactgagtcgtaggcgttttgaaactgccaacttagatataccaccagca
aatgctagtagatcaggaccaccacctagctcagggatgagcagcagggtaaacttgcca
gcaacagcacccaactttaataatccttcgccaagtgtagttactgctaccacttctgtt
catgagagcagcaaaaacatacagacattttccacagccagcataggaactgctcctcca
agtatggggacttcgtttgggagtccaacattcagctcgaccattccgagtacagcttct
ccaatgaacacggtcccaccaccaccaattcctccaatcccagcgatgccatctttgcca
ccgctgccatccattcccccaataccagttcctcctccagtaccaacattgcctcctgtg
cctcctgtgcctcccattcccccagtcccttctgtgccacctattaacccattgccaccc
atgtcaggcatgccacccttgaatccaccacctgtggcacctctacctactggaatgaat
ggctctggagcacctatgagtctgaacaataatctgaaccctgtgtttctgggtccatta
aatcctgttaaccctatccagatgaactctcaaagcagcgtgaagtcacttcccatcaac
cccgatgatctgtatgtgagtgtgcatggaatgcccttttctgcgatggaaaatgatgtc
agagagtttttccacgggcttcgagttgatgcagtacatttgttaaaagatcacgtaggt
cgaaataatgggaatggattggttaagtttctctcacctcaagatacatttgaagctttg
aaacggaacagaatgctgatgatacaacgctatgtggaagtcagtcctgccacagagaga
cagtgggtagctgctggaggtcatatcacttttaaacaaagtatggggtcttctggacaa
gcccatccccctccacagacacttccaaggtcaaaatcgcccagtgggcagaaaaggtca
cggtcaagatcaccacatgaggctggcttttgtgtttacttaaaagggctaccatttgaa
gcagaaaacaaacatgtcattgatttttttaagaagttggatattgtggaagatagtatt
tatatagcttatggacccaatgggaaagcgactggtgaaggctttgttgaattcaggaat
gatgctgactataaggctgcactgtgccgtcataaacaatacatgggcaatcgctttatc
caagttcatccaattactaagaaaggtatgctagaaaagatagatatgattcgaaaacga
cttcaaaacttcagctatgaccagagggaaatagtgttaaatccggagggggatgtcaat
tctgccaaagtctgtgcccatataacaaacattccattcagcattaccaagatggacgtt
cttcagttcctagaaggaatcccagtggatgagaatgctgtacatgttcttgttgataac
aatgggcaaggtctagggcaagcactggttcagtttaaaacagaagatgatgctcgtaaa
tctgaacacttacaccgtaaaaagctgaatgggagagaagcttttgttcatatagttacc
ctagaagatatgcgagagattgagaaaaatcccccagcccaaggaaaaaagggcttaaag
attcctgttccaggtaatcctgcagttccagtgatgcctagtacagggatgcctgctgct
ggaattcccactgctggaatacccggtgctgggatacctggtgccggaatgccaggtgct
ggaatgccaggtgctggaatgcctaatgcgggtatgcccactgctggaatgcctggtgct
gggatgcccagcgctggaatacctggtgccggaatacctggtgccggaatacccggtccc
gcaatgcccggtccagcaatgcccggtccagcaatacccggtcccgcaatgcctggtcct
gcaatgcctggtcccgcaatacccggtcccgcaatacctggtgccgcaatacctggtcct
gctatgcccggtgctggcattcccactgcaggaggagaagagcatgtcttcttgactgta
ggatcgaaggaggccaataatgggccgccatttaacttccctggtaattttggtgggcca
aatgcctttggaccaccacttccccctccaggattaggaggtgcttttggtgatgttagg
cctgttatgccttcagttggaaacagtggtttgcctggcctaggactggaagttccaggt
tttggaggtgcaccaaataatttaagtgggccgtcaggatttggggggatccctcagaat
tttggaaatggccctggtagtttaagtgctcctccaggttttggaagtggaccccctggt
cttggaaacgttcctgggcatttgagtgggcctccagcgtttgggcctgggcctgggcct
ggcccaatacatattgggggtccccctggctttgcagctagctctggaaaaccaggacct
acaataattaaggtgcagaacatgccctttactgtttctattgatgaaattttagatttc
ttttatggttatcaggtaatcccaggttcagtatgtttaaaatacaatgaaaaaggtatg
cctacaggtgaagccatggtggcctttgaatcgcgggatgaagccactgctgcggtcatt
gacttgaatgataggcctataggttcgagaaaggtaaagcttgttttagggtag
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